Gene ECH74115_1105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1105 
Symbol 
ID6971354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1135807 
End bp1136259 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content49% 
IMG OID643385113 
Productfimbrial protein 
Protein accessionYP_002269612 
Protein GI209400442 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000686387 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATATTT ATGGGAATGT GGTCGATCAG GGCTGTGATG TCGCCACCAA AAGTGCATTA 
CAAAATATTC ATATTGGTGA TTTTAATATC AGTGATTTTC AGGCCGCGAA TACCGTAAGC
ACTGCTGCTG ATTTGAATAT CGATATCACC GGTTGTGCCG CTGGTATTAC TGGCGCGGAC
GTCCTTTTTA GCGGCGAGGC TGACACCCTT GCGCCGACAC TGCTCAAACT AACTGACACA
GGCGGAAGCG GTGGTATGGC AACGGGGATT GCCGTGCAAA TTCTTGATGC GCAAAGTCAG
CAAGAAATCC CGCTCAATCA GGTCCAGCCT CTTACGCCCT TAAAAGCCGG GGATAACACA
CTCAAATATC AACTTCGTTA TAAGTCCACA AAGGCGGGAG CAACGGGCGG TAATGCGACG
GCGGTTCTCT ATTTTGATCT GGTTTACCAG TGA
 
Protein sequence
MHIYGNVVDQ GCDVATKSAL QNIHIGDFNI SDFQAANTVS TAADLNIDIT GCAAGITGAD 
VLFSGEADTL APTLLKLTDT GGSGGMATGI AVQILDAQSQ QEIPLNQVQP LTPLKAGDNT
LKYQLRYKST KAGATGGNAT AVLYFDLVYQ