Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_1101 |
Symbol | |
ID | 6967162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 1131345 |
End bp | 1132019 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643385112 |
Product | periplasmic pilus chaperone family protein |
Protein accession | YP_002269611 |
Protein GI | 209396888 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0720746 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 0.540413 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGTAA GTTTAACGGC AATATTACTC AGCTGTTCGT CCACATGGGC GGCAGGTAAA GGCGGGGTTG GACTTGCAGC AACACGTCTT GTTTATTCGG AAGGTGAAGA GCAAATTTCA CTGGGTGTAC GTAACACCAG TCCGGATGTT CCTTATCTGA TTCAGTCATG GGTGATGACC CCAGATAATA AAAAATCAGC GGACTTTATT ATTACACCAC CGCTATTTGT GCTGAATCCG GCAAACGAGA ATCTGTTACG CATTATGTAC ATTGGCGCGC CGTTGGCGAA AGACAGAGAA ACTCTTTTCT TCACTAGCGT ACGGGCAGTC CCTTCAACAA CGAAGCGGGA AGAAGGCAAT ACCCTGAAGA TTGCCACACA AAGCGTCATC AAACTTTTCT GGCGACCAAA AGGTTTAGCG TATCCCTTAG GCGAGGCTCC GGCGAAACTG CGTTGCACTT CGTCAGCTGA CATGGTTACG GTCAGTAACC CAACACCTTA TTTCATTACC CTGACAGACC TGAAAATAGG TGGAAAGTTA GTTAAAAATC AAATGATTTC CCCCTTTGAT AAATACCAAT TCTCTCTGCC AAAGGGTGCC AAAAATAGCA GCGTAACGTA TCGAACCATC AATGACTACG GGGCGGAAAC GCCGCAACTC AACTGTAAAT CGTAA
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Protein sequence | MTVSLTAILL SCSSTWAAGK GGVGLAATRL VYSEGEEQIS LGVRNTSPDV PYLIQSWVMT PDNKKSADFI ITPPLFVLNP ANENLLRIMY IGAPLAKDRE TLFFTSVRAV PSTTKREEGN TLKIATQSVI KLFWRPKGLA YPLGEAPAKL RCTSSADMVT VSNPTPYFIT LTDLKIGGKL VKNQMISPFD KYQFSLPKGA KNSSVTYRTI NDYGAETPQL NCKS
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