Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_1096 |
Symbol | ssuC |
ID | 6969953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 1126868 |
End bp | 1127659 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643385107 |
Product | alkanesulfonate transporter permease subunit |
Protein accession | YP_002269606 |
Protein GI | 209400693 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00432775 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 0.422148 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACGC CAGTGAAGAA GTGGTTATTG CGCGTTGCCC CCTGGTTTTT ACCGGTGGGC ATCGTGACGG TGTGGCAACT GGCCTCCTCG GTTGGCTGGT TGTCGACGCG TATTTTGCCC TCACCGGAAG GGGTGGTGAT GGCGTTCTGG ACGCTCTCAG CCAGCGGCGA ATTGTGGCAG CATCTGGCGA TCAGCTCCTG GCGGGCGCTG ATTGGTTTTT CAATTGGCGG CTCGCTGGGG TTGATTTTGG GACTGATTAG CGGACTGTCG CGCTGGGGAG AAAGGCTGCT GGATACCTCA ATTCAGATGT TGCGCAACGT GCCGCATCTG GCGCTGATCC CGCTGGTGAT TTTGTGGTTT GGCATTGATG AATCCGCAAA AATCTTTCTG GTGGCGCTCG GTACGCTATT CCCCATTTAT ATCAACACCT GGCATGGCAT CCGTAATATC GATCGCGGGT TGGTGGAGAT GGCGCGTAGC TATGGATTAT CCGGCATACC GCTGTTTATC CATGTGATCC TGCCTGGTGC CCTGCCCTCA ATTATGGTCG GCGTGCGTTT TGCGTTGGGC CTGATGTGGC TGACGCTGAT TGTTGCCGAA ACCATTTCTG CCAATTCAGG CATTGGTTAT CTGGCGATGA ATGCGCGGGA GTTTTTGCAA ACGGACGTGG TGGTAGTCGC TATTATTCTT TACGCCCTGC TCGGCAAACT TGCTGACGTC AGCGCGCAGC TGTTAGAGCG CCTCTGGTTG CGCTGGAACC CGGCTTATCA TTTGAAGGAG GCCACGGTAT GA
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Protein sequence | MATPVKKWLL RVAPWFLPVG IVTVWQLASS VGWLSTRILP SPEGVVMAFW TLSASGELWQ HLAISSWRAL IGFSIGGSLG LILGLISGLS RWGERLLDTS IQMLRNVPHL ALIPLVILWF GIDESAKIFL VALGTLFPIY INTWHGIRNI DRGLVEMARS YGLSGIPLFI HVILPGALPS IMVGVRFALG LMWLTLIVAE TISANSGIGY LAMNAREFLQ TDVVVVAIIL YALLGKLADV SAQLLERLWL RWNPAYHLKE ATV
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