| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1089 |
|---|
| Symbol | aspC |
|---|
| ID | 6966649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 1117346 |
|---|
| End bp | 1118536 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643385101 |
|---|
| Product | aromatic amino acid aminotransferase |
|---|
| Protein accession | YP_002269600 |
|---|
| Protein GI | 209397827 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00147404 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 0.202333 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGAGA ACATTACCGC CGCTCCTGCC GACCCGATTC TGGGCCTGGC CGATCTGTTT
CGTGCCGATG AACGTCCCGG CAAAATTAAC CTCGGGATTG GTGTCTATAA AGATGAGACG
GGCAAAACCC CGGTACTGAC CAGCGTGAAA AAGGCTGAAC AGTATCTGCT CGAAAATGAA
ACCACCAAAA ATTACCTCGG CATTGACGGC ATCCCTGAAT TTGGTCGCTG CACTCAGGAA
CTGCTGTTTG GTAAAGGTAG CGCCCTGATC AATGACAAAC GTGCTCGCAC GGCACAGACT
CCGGGTGGCA CTGGCGCACT ACGCATAGCT GCCGATTTCC TGGCAAAAAA TACCAGCGTT
AAGCGAGTGT GGGTGAGCAA CCCAAGCTGG CCGAACCATA AGAGCGTCTT TAACTCTGCA
GATCTGGAAG TTCGTGAATA CGCTTATTAT GATGCGGAAA ACCACACCCT TGACTTCGAT
GCACTGATTA ACAGCCTGAA CGAAGCTCAG GCTGGCGACG TAGTGCTGTT CCATGGCTGC
TGCCACAACC CAACCGGTAT CGACCCTACG CTGGAACAAT GGCAGACACT GGCACAACTC
TCCGTTGAGA AAGGCTGGTT ACCGCTGTTT GACTTCGCTT ACCAGGGTTT TGCCCGTGGT
CTGGAAGAAG ATGCTGAAGG ACTGCGCGCT TTCGCGGCTA TGCATAAAGA GCTGATTGTT
GCCAGTTCCT ACTCTAAAAA CTTTGGCCTG TACAACGAGC GTGTTGGCGC TTGTACTCTG
GTTGCTGCCG ACAGTGAAAC CGTTGATCGC GCATTCAGCC AAATGAAAGC GGCGATTCGC
GCTAACTACT CTAACCCACC AGCACACGGC GCTTCTGTTG TTGCCACCAT CCTGAGCAAC
GATGCGTTAC GTGCGATTTG GGAACAAGAG CTGACTGATA TGCGCCAGCG TATTCAGCGT
ATGCGTCAGT TGTTCGTCAA TACGCTGCAG GAAAAAGGCG CAAACCGCGA CTTCAGCTTT
ATCATCAAAC AGAACGGCAT GTTCTCCTTC AGTGGCCTGA CAAAAGAACA AGTGCTGCGT
CTGCGCGAAG AGTTTGGCGT GTATGCTGTT GCTTCTGGTC GCGTAAACGT GGCCGGGATG
ACACCAGATA ACATGGCTCC GCTGTGCGAA GCGATTGTGG CAGTGCTGTA A
|
|---|
| Protein sequence | MFENITAAPA DPILGLADLF RADERPGKIN LGIGVYKDET GKTPVLTSVK KAEQYLLENE
TTKNYLGIDG IPEFGRCTQE LLFGKGSALI NDKRARTAQT PGGTGALRIA ADFLAKNTSV
KRVWVSNPSW PNHKSVFNSA DLEVREYAYY DAENHTLDFD ALINSLNEAQ AGDVVLFHGC
CHNPTGIDPT LEQWQTLAQL SVEKGWLPLF DFAYQGFARG LEEDAEGLRA FAAMHKELIV
ASSYSKNFGL YNERVGACTL VAADSETVDR AFSQMKAAIR ANYSNPPAHG ASVVATILSN
DALRAIWEQE LTDMRQRIQR MRQLFVNTLQ EKGANRDFSF IIKQNGMFSF SGLTKEQVLR
LREEFGVYAV ASGRVNVAGM TPDNMAPLCE AIVAVL
|
|---|
| |