Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_1082 |
Symbol | smtA |
ID | 6968363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 1106535 |
End bp | 1107320 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643385094 |
Product | putative metallothionein SmtA |
Protein accession | YP_002269593 |
Protein GI | 209396225 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00106092 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGATC GCAATTTTGA TGATATTGCG GAAAAGTTTT CCCGTAACAT TTACGGCACC ACCAAAGGGC AGCTTCGACA GGCTATTCTG TGGCAGGATC TCGATCGCGT GCTGGCGGAA ATGGGTCCGC AAAAACTGCG TGTGCTGGAT GCGGGCGGTG GAGAAGGGCA GACCGCAATC AAAATGGCCG AGCGCGGGCA TCAGGTCATT TTATGCGATC TTTCTGCGCA GATGATCGAC CGCGCAAAAC AGGCGGCAGA AGCAAAAGGT GTGAGCGACA ACATGCAATT TATACATTGC GCCGCTCAGG ATGTTGCTTC GCATTTGGAA ACGCCCGTTG ATCTGATATT GTTCCATGCG GTGCTCGAGT GGGTGGCTGA TCCCCGCAGC GTATTGCAGA CCCTGTGGTC AGTGTTGCGT CCAGGCGGCG TGTTGTCGTT AATGTTCTAC AATGCGCATG GTTTGTTGAT GCATAACATG GTCGCCGGGA ATTTTGATTA CGTGCAGGCG GGAATGCCGA AAAAGAAAAA ACGGACGCTT TCGCCAGATT ATCCACGCGA CCCGACGCAG GTTTATCTGT GGCTGGAAGA AGCTGGTTGG CAAATTATGG GTAAGACAGG CGTTCGCGTG TTTCATGATT ATCTGCGCGA GAAGCACCAG CAGCGCGACT GCTATGAAGC ATTACTTGAA TTAGAAACGC GTTATTGCCG TCAGGAACCG TATATTACCC TGGGGCGTTA TATTCATGTC ACCGCGCGCA AACCGCAGAG CAAGGATAAA GTATGA
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Protein sequence | MQDRNFDDIA EKFSRNIYGT TKGQLRQAIL WQDLDRVLAE MGPQKLRVLD AGGGEGQTAI KMAERGHQVI LCDLSAQMID RAKQAAEAKG VSDNMQFIHC AAQDVASHLE TPVDLILFHA VLEWVADPRS VLQTLWSVLR PGGVLSLMFY NAHGLLMHNM VAGNFDYVQA GMPKKKKRTL SPDYPRDPTQ VYLWLEEAGW QIMGKTGVRV FHDYLREKHQ QRDCYEALLE LETRYCRQEP YITLGRYIHV TARKPQSKDK V
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