Gene ECH74115_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1080 
Symbol 
ID6969156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1105620 
End bp1106399 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content52% 
IMG OID643385093 
Producthypothetical protein 
Protein accessionYP_002269592 
Protein GI209397397 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00727998 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTTTA CACTGAAAAA AGTGATTGGC AATATGTTGC TGCCACTTCC GCTGATGTTG 
TTAATTATTG GCGCTGGCCT GGCGCTACTG TGGTTTAGCC GTTTTCAAAA AACCGGGAAG
ATTTTTATTA GCATTGGGTG GCTGGCACTC TTGTTATTGA GTTTGCAACC GGTAGCCGAC
CGCCTGCTGC GTCCCATCGA AAGCACCTAT CCGACATGGA ATAATTCGCA AAAAGTGGAC
TATATCGTGG TGCTCGGAGG TGGTTATACC TGGAACCCGC AGTGGGCACC GAGCTCTAAT
TTAATCAATA ACAGTCTGCC ACGCCTGAAT GAGGGTATCC GTTTATGGCG CGAAAATCCG
GGTTCAAAAC TGATCTTCAC GGGAGGCGTA GCAAAAACCA ATACGGTGAG TACAGCGGAA
GTAGGTGCCA GAGTTGCGCA ATCGCTGGGC GTACCGCGCG AGCAAATTAT CACCCTGGAT
TTGCCAAAAG ATACCGAAGA AGAAGCTGCG GCAGTGAAAC AGGCGATTGG TGACGCCCCT
TTCCTGCTGG TGACCTCCGC ATCACATCTG CCGCGGGCGA TGATCTTTTT TCAGCAGGAA
GGGTTAAATC CACTACCAGC CCCGGCGAAT CAGTTGGCCA TCGACTCGCC GCTTAACCCG
TGGGAACGGG CAATCCCTTC TCCGGTCTGG TTGATGCATA GCGATCGTGT TGGCTATGAA
ACGCTTGGCC GCATCTGGCA GTGGCTAAAA GGTTCGTCAG GCGAGCCACG GCAAGAGTGA
 
Protein sequence
MLFTLKKVIG NMLLPLPLML LIIGAGLALL WFSRFQKTGK IFISIGWLAL LLLSLQPVAD 
RLLRPIESTY PTWNNSQKVD YIVVLGGGYT WNPQWAPSSN LINNSLPRLN EGIRLWRENP
GSKLIFTGGV AKTNTVSTAE VGARVAQSLG VPREQIITLD LPKDTEEEAA AVKQAIGDAP
FLLVTSASHL PRAMIFFQQE GLNPLPAPAN QLAIDSPLNP WERAIPSPVW LMHSDRVGYE
TLGRIWQWLK GSSGEPRQE