Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_1080 |
Symbol | |
ID | 6969156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 1105620 |
End bp | 1106399 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643385093 |
Product | hypothetical protein |
Protein accession | YP_002269592 |
Protein GI | 209397397 |
COG category | [S] Function unknown |
COG ID | [COG1434] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00727998 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTTTTTA CACTGAAAAA AGTGATTGGC AATATGTTGC TGCCACTTCC GCTGATGTTG TTAATTATTG GCGCTGGCCT GGCGCTACTG TGGTTTAGCC GTTTTCAAAA AACCGGGAAG ATTTTTATTA GCATTGGGTG GCTGGCACTC TTGTTATTGA GTTTGCAACC GGTAGCCGAC CGCCTGCTGC GTCCCATCGA AAGCACCTAT CCGACATGGA ATAATTCGCA AAAAGTGGAC TATATCGTGG TGCTCGGAGG TGGTTATACC TGGAACCCGC AGTGGGCACC GAGCTCTAAT TTAATCAATA ACAGTCTGCC ACGCCTGAAT GAGGGTATCC GTTTATGGCG CGAAAATCCG GGTTCAAAAC TGATCTTCAC GGGAGGCGTA GCAAAAACCA ATACGGTGAG TACAGCGGAA GTAGGTGCCA GAGTTGCGCA ATCGCTGGGC GTACCGCGCG AGCAAATTAT CACCCTGGAT TTGCCAAAAG ATACCGAAGA AGAAGCTGCG GCAGTGAAAC AGGCGATTGG TGACGCCCCT TTCCTGCTGG TGACCTCCGC ATCACATCTG CCGCGGGCGA TGATCTTTTT TCAGCAGGAA GGGTTAAATC CACTACCAGC CCCGGCGAAT CAGTTGGCCA TCGACTCGCC GCTTAACCCG TGGGAACGGG CAATCCCTTC TCCGGTCTGG TTGATGCATA GCGATCGTGT TGGCTATGAA ACGCTTGGCC GCATCTGGCA GTGGCTAAAA GGTTCGTCAG GCGAGCCACG GCAAGAGTGA
|
Protein sequence | MLFTLKKVIG NMLLPLPLML LIIGAGLALL WFSRFQKTGK IFISIGWLAL LLLSLQPVAD RLLRPIESTY PTWNNSQKVD YIVVLGGGYT WNPQWAPSSN LINNSLPRLN EGIRLWRENP GSKLIFTGGV AKTNTVSTAE VGARVAQSLG VPREQIITLD LPKDTEEEAA AVKQAIGDAP FLLVTSASHL PRAMIFFQQE GLNPLPAPAN QLAIDSPLNP WERAIPSPVW LMHSDRVGYE TLGRIWQWLK GSSGEPRQE
|
| |