| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1076 |
|---|
| Symbol | lpxK |
|---|
| ID | 6969538 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 1101364 |
|---|
| End bp | 1102350 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643385088 |
|---|
| Product | tetraacyldisaccharide 4'-kinase |
|---|
| Protein accession | YP_002269587 |
|---|
| Protein GI | 209399961 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1663] Tetraacyldisaccharide-1-P 4'-kinase |
|---|
| TIGRFAM ID | [TIGR00682] tetraacyldisaccharide 4'-kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0122696 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 64 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAAA AAATCTGGTC TGGTGAATCC CCTTTGTGGC GGCTATTGCT GCCACTCTCC
TGGTTGTATG GCCTGGTGAG TGGCGCGATC CGTCTTTGCT ATAAACTAAA ACTGAAGCGC
GCCTGGCGTG CCCCCGTACC GGTTGTCGTG GTTGGTAATC TCACCGCAGG CGGCAACGGA
AAAACCCCGG TCGTTGTCTG GCTGGTGGAA CAGTTGCAAC AGCGCGGTAT TCGCGTGGGG
GTCGTATCGC GGGGATATGG TGGTAAGGCT GAATCTTATC CGCTGTTATT GTCGGCAGAT
ACCACCACAG CACAGGCGGG TGATGAACCT GTGTTGATTT ATCAACGCAC TGATGCGCCT
GTTGCGGTTT CTCCCGTTCG TTCTGATGCG GTAAAAGCCA TTCTGGCGCA ACACCCTGAT
GTGCAGATCA TCGTAACCGA CGACGGTTTA CAGCATTACC GTCTGGCGCG TGATGTGGAA
ATTGTCGTTA TTGATGGTGT GCGTCGCTTT GGCAATGGCT GGTGGTTGCC GGCGGGGCCA
ATGCGTGAGC GAGCGGGGCG CTTAAAGTCA GTTGATGCGG TAATCGTCAA CGGCGGTGTC
CCCCGCAGCG GTGAAATCCC CATGCATCTG CTGCCGGGTC AGGCGGTGAA TTTACGTACC
GGTACGCGTT GTGACGTTGC TCAGCTTGAA CATGTGGTGG CGATGGCAGG GATTGGGCAT
CCGCCGCGCT TTTTTGCCAC GCTGAAGATG TGCGGCGTAC AACCGGAAAA ATGTGTACCG
CTGGCCGATC ATCAGTCTTT GAACCATGCG GATGTCAGCG CGTTGGTAAG CACCGGGCAA
ACGCTGGTAA TGACTGAAAA AGATGCGGTG AAATGCCGGG CCTTTGCAGA AGAAAATTGG
TGGTATTTGC CCGTTGACGC ACAGCTTTCA GGTGATGAAC CAGCGAAACT GCTTGCGCAA
CTAACCTCGC TGGCTTCTGG CAACTAG
|
|---|
| Protein sequence | MIEKIWSGES PLWRLLLPLS WLYGLVSGAI RLCYKLKLKR AWRAPVPVVV VGNLTAGGNG
KTPVVVWLVE QLQQRGIRVG VVSRGYGGKA ESYPLLLSAD TTTAQAGDEP VLIYQRTDAP
VAVSPVRSDA VKAILAQHPD VQIIVTDDGL QHYRLARDVE IVVIDGVRRF GNGWWLPAGP
MRERAGRLKS VDAVIVNGGV PRSGEIPMHL LPGQAVNLRT GTRCDVAQLE HVVAMAGIGH
PPRFFATLKM CGVQPEKCVP LADHQSLNHA DVSALVSTGQ TLVMTEKDAV KCRAFAEENW
WYLPVDAQLS GDEPAKLLAQ LTSLASGN
|
|---|
| |