| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1050 |
|---|
| Symbol | trxB |
|---|
| ID | 6972125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 1065518 |
|---|
| End bp | 1066483 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643385062 |
|---|
| Product | thioredoxin reductase |
|---|
| Protein accession | YP_002269561 |
|---|
| Protein GI | 209400308 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0492] Thioredoxin reductase |
|---|
| TIGRFAM ID | [TIGR01292] thioredoxin-disulfide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000235297 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 67 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCACGA CCAAACACAG TAAACTGCTT ATCCTGGGTT CAGGCCCGGC GGGATACACC
GCTGCTGTCT ATGCGGCGCG CGCCAACCTG CAACCTGTGC TGATTACCGG CATGGAAAAA
GGCGGCCAAC TGACCACCAC CACGGAAGTG GAAAACTGGC CTGGCGATCC AAACGATCTG
ACCGGTCCGT TATTAATGGA GCGCATGCAC GAACATGCCA CCAAGTTTGA AACTGAGATC
ATTTTTGATC ATATCAACAA GGTGGATCTG CAAAACCGTC CGTTCCGTCT GAATGGCGAT
AACGGCGAAT ACACTTGCGA CGCGCTGATT ATTGCCACCG GAGCTTCTGC ACGCTATCTC
GGCCTGCCCT CTGAAGAAGC CTTTAAAGGC CGTGGAGTTT CTGCTTGTGC AACCTGCGAC
GGTTTCTTCT ATCGCAACCA GAAAGTTGCG GTCATCGGCG GCGGCAATAC CGCGGTTGAA
GAGGCGCTGT ATCTGTCTAA CATCGCTTCG GAAGTGCATC TGATTCACCG CCGTGACGGT
TTCCGCGCGG AAAAAATCCT CATTAAGCGT CTGATGGATA AAGTGGAGAA CGGCAACATC
ATTCTGCACA CCAACCGTAC GCTGGAAGAA GTGACCGGCG ATCAAATGGG TGTCACTGGC
GTTCGTCTGC GCGATACGCA AAACAGCGAT AACATCGAGT CACTCGACGT TGCCGGTCTG
TTTGTTGCTA TCGGTCACAG CCCGAATACT GCCATTTTCG AAGGGCAGCT GGAACTGGAA
AACGGCTACA TCAAAGTGCA GTCGGGTATT CATGGTAATG CCACCCAGAC CAGCATTCCT
GGCGTCTTTG CCGCAGGCGA CGTGATGGAT CACATTTATC GCCAGGCCAT TACATCTGCT
GGTACAGGCT GCATGGCAGC ACTTGATGCG GAACGCTACC TCGATGGTTT AGCTGACGCA
AAATAA
|
|---|
| Protein sequence | MGTTKHSKLL ILGSGPAGYT AAVYAARANL QPVLITGMEK GGQLTTTTEV ENWPGDPNDL
TGPLLMERMH EHATKFETEI IFDHINKVDL QNRPFRLNGD NGEYTCDALI IATGASARYL
GLPSEEAFKG RGVSACATCD GFFYRNQKVA VIGGGNTAVE EALYLSNIAS EVHLIHRRDG
FRAEKILIKR LMDKVENGNI ILHTNRTLEE VTGDQMGVTG VRLRDTQNSD NIESLDVAGL
FVAIGHSPNT AIFEGQLELE NGYIKVQSGI HGNATQTSIP GVFAAGDVMD HIYRQAITSA
GTGCMAALDA ERYLDGLADA K
|
|---|
| |