Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_1040 |
Symbol | macB |
ID | 6966959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 1054778 |
End bp | 1056724 |
Gene Length | 1947 bp |
Protein Length | 648 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643385053 |
Product | macrolide transporter ATP-binding /permease protein |
Protein accession | YP_002269553 |
Protein GI | 209395862 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00510496 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCCTT TGCTCGAATT AAAGGATATT CGTCGCAGCT ATCCTGCCGG TGATGAGCAG GTTGAGGTGC TGAAGGGCAT CACCCTCGAT ATTTATGCCG GTGAGATGGT AGCGATTGTT GGCGCTTCGG GTTCCGGTAA ATCGACCCTG ATGAATATTC TCGGCTGTCT GGATAAGGCC ACCAGCGGCA CCTATCGCGT CGCCGGTCAG GATGTTGCCA CGCTGGACGC CGATGCGCTG GCGCAACTGC GCCGCGAGCA TTTCGGCTTT ATTTTCCAGC GTTACCATTT GCTTTCGCAT TTAACCGCCG AGCAGAACGT TGAAGTACCA GCCGTCTATG CTGGTCTTGA GCGGAAACAG CGGCTGCTTC GCGCCCAGGA GTTGCTGCAA CGACTGGGGC TGGAAGACCG TACAGAGTAT TATCCGGCAC AGCTTTCGGG TGGTCAGCAA CAGCGCGTTA GCATCGCGCG GGCATTGATG AACGGCGGTC AGGTAATTCT TGCCGATGAA CCGACCGGCG CACTGGACAG CCATTCAGGC GAAGAGGTGA TGGCGATCCT GCATCAGCTG CGCGATCGCG GGCATACGGT GATTATCGTC ACTCACGATC CGCAGGTCGC TGCTCAGGCC GAGCGGGTGA TCGAAATTCG CGACGGCGAA ATTGTGCGCA ATCCTCCCGC CATTGAAAAA GTGAATGTTG CTGGCGGGAC GGAACCTGTT GTCAACACGG CGTCTGGCTG GCGGCAGTTT GTCAGCGGTT TTAATGAGGC GCTGACGATG GCATGGCGGG CGCTGGCAGC GAATAAAATG CGTACTTTAC TGACCATGCT GGGGATTATA ATCGGTATTG CGTCGGTGGT TTCCATTGTC GTGGTGGGCG ACGCCGCCAA ACAAATGGTG CTGGCGGATA TTCGTTCTAT TGGTACGAAT ACTATTGATG TCTATCCCGG GAAAGATTTT GGCGATGACG ATCCGCAATA TCAACAGGCG CTGAAGTACG ATGACTTAAT CGCCATCCAA AAACAACCGT GGGTCGCTTC AGCCACACCT GCCGTCTCGC AAAACCTGCG CCTGCGTTAT AACAATGTTG ATGTTGCTGC CAGTGCCAAT GGCGTGAGCG GCGATTATTT TAATGTCTAT GGCATGACCT TCAGTGAAGG AAACACCTTT AACCAGGAAC AGCTGAACGG TCGTGCGCAG GTCGTGGTTC TCGACAGTAA TACTCGCCGC CAGCTTTTCC CCCATAAAGC AGATGTGGTT GGCGAGGTGA TTCTGGTCGG CAATATGCCC GCCAGAGTCA TTGGTGTGGC GGAAGAAAAA CAGTCGATGT TTGGTAGCAG TAAAGTGCTG CGTGTCTGGC TACCTTACAG CACGATGTCC GGGCGAGTTA TGGGCCAGTC GTGGCTGAAC TCCATTACTG TCAGGGTGAA AGAAGGATTT GACAGCGCCG AGGCGGAACA GCAACTCACG CGTTTACTTT CACTGCGCCA CGGTAAGAAG GATTTCTTTA CCTGGAACAT GGACGGCGTC TTGAAAACCG TTGAAAAGAC CACACGTACT TTACAACTGT TTATGACGCT GGTGGCGGTG ATTTCGCTGG TAGTGGGCGG TATTGGTGTA ATGAATATTA TGCTGGTGTC AGTGACCGAG CGGACGCGGG AAATTGGCAT TCGCATGGCT GTAGGTGCGC GAGCAAGCGA TGTTTTGCAA CAGTTCCTGA TCGAAGCCGT ACTGGTTTGC CTGGTCGGTG GCGCGTTGGG AATAACACTG TCACTGTTAA TTGCTTTCAC CTTGCAGCTT TTCTTACCCG GCTGGGAGAT TGGTTTTTCA CCGTTGGCAC TGCTGCTGGC GTTTCTCTGC TCGACGGTCA CCGGGATTTT ATTTGGCTGG TTACCCGCAC GAAATGCGGC ACGACTGGAT CCAGTAGATG CTCTGGCACG AGAGTAA
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Protein sequence | MTPLLELKDI RRSYPAGDEQ VEVLKGITLD IYAGEMVAIV GASGSGKSTL MNILGCLDKA TSGTYRVAGQ DVATLDADAL AQLRREHFGF IFQRYHLLSH LTAEQNVEVP AVYAGLERKQ RLLRAQELLQ RLGLEDRTEY YPAQLSGGQQ QRVSIARALM NGGQVILADE PTGALDSHSG EEVMAILHQL RDRGHTVIIV THDPQVAAQA ERVIEIRDGE IVRNPPAIEK VNVAGGTEPV VNTASGWRQF VSGFNEALTM AWRALAANKM RTLLTMLGII IGIASVVSIV VVGDAAKQMV LADIRSIGTN TIDVYPGKDF GDDDPQYQQA LKYDDLIAIQ KQPWVASATP AVSQNLRLRY NNVDVAASAN GVSGDYFNVY GMTFSEGNTF NQEQLNGRAQ VVVLDSNTRR QLFPHKADVV GEVILVGNMP ARVIGVAEEK QSMFGSSKVL RVWLPYSTMS GRVMGQSWLN SITVRVKEGF DSAEAEQQLT RLLSLRHGKK DFFTWNMDGV LKTVEKTTRT LQLFMTLVAV ISLVVGGIGV MNIMLVSVTE RTREIGIRMA VGARASDVLQ QFLIEAVLVC LVGGALGITL SLLIAFTLQL FLPGWEIGFS PLALLLAFLC STVTGILFGW LPARNAARLD PVDALARE
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