Gene ECH74115_1028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1028 
Symbol 
ID6967017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1040208 
End bp1041257 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content54% 
IMG OID643385042 
ProductNAD dependent epimerase/dehydratase family protein 
Protein accessionYP_002269542 
Protein GI209396994 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.779011 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACGT CATTTTCTCA ACAACAGTGG ATTGATATGA AGGTACTGGT TACCGGCGCC 
ACCAGCGGCT TAGGTCGAAA CGCGGTAGAG TTTTTATGCC AGAAAGGCAT CAGCGTGCGA
GCGACCGGTC GCAACGAGGC AATGGGTAAA TTGCTGGAAA AAATGGGCGC AGAGTTTGTT
CCGGCGGATC TGACCGAGCT GGTCTCATCA CAAGCTAAAG TGATGCTCGC GGGCATTGAT
ACGCTGTGGC ACTGCTCCAG CTTTACCTCT CCCTGGGGGA CACAACAGGC TTTCGATCTG
GCTAACGTTC GCGCCACTCG CCGCCTAGGT GAATGGGCTG TCGCCTGGGG TGTACGTAAC
TTTATTCATA TCTCTTCTCC CTCCCTGTAC TTCGATTATC ACCACCATCG CGATATTAAA
GAAGATTTTC GCCCTCACCG CTTCGCCAAC GAGTTTGCCC GCAGCAAAGC GGCCAGCGAA
GAAGTGATCA ATATGCTTTC GCAGGCGAAT CCACAAACGC GCTTTACTAT TCTGCGCCCA
CAAAGTCTGT TCGGACCGCA CGATAAAGTC TTTATCCCCC GTCTTGCGCA TATGATGCAC
CACTACGGCA GCATTCTGTT ACCGCATGGC GGCAGTGCGC TGGTGGATAT GACCTACTAT
GAAAATGCCG TGCACGCCAT GTGGCTGGCA AGCCAGGAAG CCTGCGATAA GCTACCTTCC
GGGCGTGTGT ACAACATCAC CAACGGCGAG CATCGCACAC TGCGCAGCAT CGTGCAGAAG
CTGATCGACG AGTTGAATAT TGACTGTCGT ATTCGTTCCG TCCCTTACCC GATGCTGGAT
ATGATCGCCC GCAGCATGGA GCGTTTAGGC CGCAAGTCAG CAAAAGAGCC GCCGCTGACC
CACTACGGCG TCTCGAAGCT TAATTTTGAC TTTACGCTGG ATATTACGCG GGCACAGGAA
GAGTTAGGTT ATCAGCCGGT CATCACCCTG GATGAAGGTA TCGAGAAAAC TGCCGCCTGG
CTGCGCGACC ACGGAAAACT GCCGCGCTAA
 
Protein sequence
MRTSFSQQQW IDMKVLVTGA TSGLGRNAVE FLCQKGISVR ATGRNEAMGK LLEKMGAEFV 
PADLTELVSS QAKVMLAGID TLWHCSSFTS PWGTQQAFDL ANVRATRRLG EWAVAWGVRN
FIHISSPSLY FDYHHHRDIK EDFRPHRFAN EFARSKAASE EVINMLSQAN PQTRFTILRP
QSLFGPHDKV FIPRLAHMMH HYGSILLPHG GSALVDMTYY ENAVHAMWLA SQEACDKLPS
GRVYNITNGE HRTLRSIVQK LIDELNIDCR IRSVPYPMLD MIARSMERLG RKSAKEPPLT
HYGVSKLNFD FTLDITRAQE ELGYQPVITL DEGIEKTAAW LRDHGKLPR