Gene ECH74115_0998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_0998 
Symbol 
ID6971092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1014781 
End bp1015989 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content55% 
IMG OID643385014 
Producttransporter, major facilitator family 
Protein accessionYP_002269514 
Protein GI209397864 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.207413 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTAA ATTCTTCACG TAATGCATTG AAACGCCGAA CCTGGGCGCT GTTTATGTTC 
TTCTTTTTGC CGGGCCTGTT AATGGCGTCC TGGGCAACCC GTACGCCTGC TATCCGCGAT
ATTCTCTCTG TCTCGATCGC TGAAATGGGC GGTGTTCTCT TTGGTCTGTC GATCGGTTCG
ATGAGCGGTA TTCTCTGCTC GGCGTGGTTA GTGAAACGCT TTGGGACACG TAATGTCATC
CTGGTCACCA TGTCCTGCGC ATTGGTCGGG ATGATGATAT TAAGTCTGGC ACTCTGGCTG
ACATCGCCCC TGCTCTTTGC CGTTGGTCTC GGCGTCTTTG GGGCAAGTTT TGGTTCTGCG
GAAGTGGCGA TAAACGTTGA AGGTGCCGCC GTTGAGCGAG AAATGAATAA AACGGTTTTG
CCGATGATGC ACGGTTTTTA TAGCCTGGGC ACGCTGGCAG GCGCTGGTGT CGGGATGGCA
CTGACGGCCT TTGGCGTTCC GGCAACGGTG CACATTTTAT TGGCGGCGCT GGTAGGCATC
GCGCCTATAT ATATCGCCAT TCAGGCAATC CCTGACGGTA CGGGCAAAAA TGCTGCCGAT
GGCACCCAGC ATGGCGAAAA AGGCGTACCT TTTTATCGCG ATATCCAGTT GCTGCTGATT
GGTGTTGTGG TGCTGGCGAT GGCCTTTGCC GAAGGTTCTG CCAACGACTG GTTACCCTTA
TTAATGGTTG ACGGTCACGG TTTTAGCCCC ACTTCCGGCT CGCTGATTTA TGCCGGTTTT
ACCCTGGGGA TGACCGTTGG ACGCTTCACT GGCGGTTGGT TCATCGACCG TTACAGTCGC
GTTGCCGTGG TTCGGGCCAG TGCGCTAATG GGGGCGTTGG GTATTGGGCT GATTATTTTT
GTCGATAGCG CCTGGGTCGC TGGGGTGTCT GTTGTACTCT GGGGACTGGG TGCCTCGCTG
GGCTTCCCGC TGACCATTTC TGCCGCCAGC GATACCGGCC CCGATGCACC AACCCGCGTC
AGTGTGGTAG CAACGACCGG TTATCTGGCT TTCCTCGTCG GGCCGCCGCT GCTGGGCTAT
CTCGGCGAAC ATTATGGATT ACGTAGTGCA ATGCTGGTTG TACTGGCGCT GGTTATTCTC
GCGGCTATTG TCGCGAAAGC CGTCGCCAAA CCCGATACCA AAACGCAGAC GGCGATGGAG
AATAGTTGA
 
Protein sequence
MTVNSSRNAL KRRTWALFMF FFLPGLLMAS WATRTPAIRD ILSVSIAEMG GVLFGLSIGS 
MSGILCSAWL VKRFGTRNVI LVTMSCALVG MMILSLALWL TSPLLFAVGL GVFGASFGSA
EVAINVEGAA VEREMNKTVL PMMHGFYSLG TLAGAGVGMA LTAFGVPATV HILLAALVGI
APIYIAIQAI PDGTGKNAAD GTQHGEKGVP FYRDIQLLLI GVVVLAMAFA EGSANDWLPL
LMVDGHGFSP TSGSLIYAGF TLGMTVGRFT GGWFIDRYSR VAVVRASALM GALGIGLIIF
VDSAWVAGVS VVLWGLGASL GFPLTISAAS DTGPDAPTRV SVVATTGYLA FLVGPPLLGY
LGEHYGLRSA MLVVLALVIL AAIVAKAVAK PDTKTQTAME NS