| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0962 |
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| Symbol | rhtA |
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| ID | 6968731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 976879 |
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| End bp | 977778 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643384983 |
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| Product | threonine and homoserine efflux system |
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| Protein accession | YP_002269483 |
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| Protein GI | 209396405 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5006] Predicted permease, DMT superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0232509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGGAGAAA GGATGCCTGG TTCATTACGT AAAATGCCGG TCTGGTTACC AATAGTCATA
TTGCTCGTTG CCATGGCGTC TATTCAAGGT GGAGCTTCGT TAGCTAAGTC ACTTTTTCCT
CTGGTGGGCG CACCGGGTGT CACTGCGCTG CGCCTGGCAT TAGGAACGCT GATCCTCATC
GCGTTCTTTA AGCCATGGCG ACTGCGCTTT GCCAAAGAGC AACGGTTACC GCTGTTGTTT
TACGGCGTTT CGCTGGGTGG GATGAATTAT CTTTTTTATC TCTCTATTCA GACGGTACCG
CTGGGTATTG CGGTGGCGCT GGAGTTCACC GGACCACTGG CGGTGGCGCT GTTCTCTTCT
CGTCGCCCGG TAGATTTCGT CTGGGTTGTG CTGGCGGTTC TTGGTCTGTG GTTCCTGCTA
CCGCTGGGGC AAGACGTTTC CCATGTCGAT TTAACCGGCT GTGCGCTGGC ACTGGGGGCC
GGGGCTTGTT GGGCTATTTA CATTTTAAGT GGGCAACGCG CAGGAGCGGA ACATGGCCCT
GCGACGGTGG CAATTGGTTC GTTGATTGCA GCGTTAATTT TCGTGCCAAT TGGAGCGCTT
CAGGCTGGTG AAGCACTCTG GCACTGGTCG GTTATTCCAT TGGGTCTGGC GGTCGCTATT
CTCTCGACCG CTCTGCCTTA TTCGCTGGAA ATGATTGCCC TCACCCGTTT GCCAACACGG
ACATTTGGTA CGCTGATGAG CATGGAACCG GCGCTGGCTG CCGTTTCCGG GATGATTTTC
CTCGGAGAAA CACTGACACC CATACAGCTG CTGGCGCTCG GCGCAATTAT CGCCGCTTCA
ATGGGTTCTA CGCTGACAGT ACGCAAAGAG AGCAAAATAA AAGAATTAGA CATTAATTAA
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| Protein sequence | MGERMPGSLR KMPVWLPIVI LLVAMASIQG GASLAKSLFP LVGAPGVTAL RLALGTLILI
AFFKPWRLRF AKEQRLPLLF YGVSLGGMNY LFYLSIQTVP LGIAVALEFT GPLAVALFSS
RRPVDFVWVV LAVLGLWFLL PLGQDVSHVD LTGCALALGA GACWAIYILS GQRAGAEHGP
ATVAIGSLIA ALIFVPIGAL QAGEALWHWS VIPLGLAVAI LSTALPYSLE MIALTRLPTR
TFGTLMSMEP ALAAVSGMIF LGETLTPIQL LALGAIIAAS MGSTLTVRKE SKIKELDIN
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