Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_0956 |
Symbol | |
ID | 6967493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 971069 |
End bp | 973294 |
Gene Length | 2226 bp |
Protein Length | 741 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643384978 |
Product | hypothetical protein |
Protein accession | YP_002269478 |
Protein GI | 209395963 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0640759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGGTGGA TCCTGTTCAT CCTCTTCTGC CTGCTGGGCG CACCTGCCCA CGCGGTATCC ATACCCGGCG TTACAACCAC AACGACAACG GACTCAACGA CTGAACCGGC CCCGGAACCG GATATCGAAC AAAAAAAAGC GGCTTATGGC GCACTGGCGG ATGTGCTGGA TAATGACACC TCGCGTAAAG AGTTGATCGA CCAGTTGCGC ACCGTCGCCG CGACGCCACC TGCTGAACCG GTCCCGAAGA TCGTGCCGCC GACGCTGGTT GAAGAGCAAA CCGTGCTGCA AAAGGTCACC GAATTCAGCC GCCATTATGG TGAAGCCCTT TCCGCCCGCT TCGGGCAGCT TTATCGCAAT ATCACCGGCT CCCCGCATAA GCCGTTTAAT CCACAAACCT TCAGCAATGC GCTGACCCAT TTTTCAATGT TAGCGGTTTT AGTGTTTGGT TTTTACTGGC TGATTCGCCT GTGCGCACTG CCGCTGTATC GCAAAATGGG TCAGTGGGCG CGGCAAAAAA ATCGTGAGCG CAGTAACTGG CTGCAGCTTC CGGCGATGAT TATCGGGGCG TTTATTATCG ACCTGCTGTT ACTGGCACTG ACATTATTTG TCGGCCAGAT ATTAAGCGAC AACCTGAATG CAGGCAGTCG CACCATCGCT TTCCAACAAA GTTTGTTTCT CAACGCCTTT GCCCTGATTG AATTTTTCAA AGCCGTACTA CGCCTGATTT TTTGCCCAAA CGTGGCGGAA CTGCGCCCGT TCACGATTCA GGACGAGAGC GCCCGTTACT GGAGTCGTCG CCTGAGCTGG TTAGGCAGTT TGATAGGTTA TGGCCTGATT GTGGCCGTGC CGATTATCTC TAATCAGGTG AATGTACAGA TAGGTGCGCT GGCGAACGTC ATCATTATGC TGTGCATGAC CGTCTGGGCG TTGTACCTGA TCTTTCGTAA TAAAAAAGAG ATTACCCAGC ATTTGCTCAA CTTTGCGGAG CATTCGCTGG CCTTTTTCAG CCTGTTTATC CGCGCCTTTG CGCTGGTGTG GCACTGGCTG GCAAGCGCCT ATTTTATCGT GCTGTTTTTC TTTTCGTTGT TCGATCCGGG CAACAGCCTG AAATTTATGA TGGGTGCAAC AGTGCGCAGC CTGGCGATTA TTGGTATCGC AGCATTTGTT TCCGGTATGT TTTCCCGCTG GCTGGCAAAA ACCATCACTC TCTCGCCACA TACTCAGCGT AACTATCCGG AGTTGCAAAA ACGGCTGAAT GGCTGGCTTT CGGCGGCGCT GAAAACGGCG CGTATTCTGA CCGTCTGCGT GGCGGTAATG CTGCTGTTGA GCGCATGGGG ATTGTTCGAT TTCTGGAACT GGCTGCAAAA CGGCGCGGGG CAGAAAACCG TAGATATCCT GATCCGTATC GCACTCATTC TTTTCTTCTC GGCGGTTGGC TGGACGGTGC TCGCCAGTTT GATCGAAAAC CGGCTGGCTT CGGATATTCA TGGCCGCCCG CTACCCAGCG CCCGCACGCG TACCCTGCTT ACGCTGTTTC GTAACGCGCT GGCGGTGATT ATCAGTACCA TCACCATCAT GATTGTGTTG TCGGAAATCG GCGTCAATAT CGCGCCATTG CTGGCAGGTG CCGGGGCATT AGGTCTGGCT ATCTCGTTTG GTTCGCAAAC GCTGGTGAAA GATATTATCA CCGGGGTATT TATTCAGTTT GAAAACGGCA TGAACACTGG AGATTTGGTG ACTATTGGGC CGTTGACCGG CACTGTGGAA CGGATGTCGA TTCGCTCCGT GGGCGTACGC CAGGATACCG GGGCGTACCA CATCATTCCG TGGTCTTCGA TTACCACCTT TGCCAACTTT GTCCGCGGCA TTGGTTCGGT AGTGGCAAAC TACGATGTTG ATCGCCATGA AGATGCTGAT AAAGCCAATC AGGCACTGAA AGATGCGGTA GCGGAATTAA TGGAAAACGA AGAAATTCGT GGGCTGATTA TTGGTGAACC GAACTTTGCC GGGATTGTTG GCTTAAGCAA TACCGCGTTT ACACTGCGTG TTTCGTTCAC CACGCTGCCA CTCAAACAGT GGACGGTACG CTTTGCCCTC GACAGCCAGG TGAAAAAACA TTTCGACCTG GCGGGCGTTC GCGCGCCGGT GCAGACTTAT CAGGTGCTGC CTGCTCCGGG CGCGACCCCG GCTGAACCGT TACCGCCGGG GGAGCCAACG CTTTAA
|
Protein sequence | MRWILFILFC LLGAPAHAVS IPGVTTTTTT DSTTEPAPEP DIEQKKAAYG ALADVLDNDT SRKELIDQLR TVAATPPAEP VPKIVPPTLV EEQTVLQKVT EFSRHYGEAL SARFGQLYRN ITGSPHKPFN PQTFSNALTH FSMLAVLVFG FYWLIRLCAL PLYRKMGQWA RQKNRERSNW LQLPAMIIGA FIIDLLLLAL TLFVGQILSD NLNAGSRTIA FQQSLFLNAF ALIEFFKAVL RLIFCPNVAE LRPFTIQDES ARYWSRRLSW LGSLIGYGLI VAVPIISNQV NVQIGALANV IIMLCMTVWA LYLIFRNKKE ITQHLLNFAE HSLAFFSLFI RAFALVWHWL ASAYFIVLFF FSLFDPGNSL KFMMGATVRS LAIIGIAAFV SGMFSRWLAK TITLSPHTQR NYPELQKRLN GWLSAALKTA RILTVCVAVM LLLSAWGLFD FWNWLQNGAG QKTVDILIRI ALILFFSAVG WTVLASLIEN RLASDIHGRP LPSARTRTLL TLFRNALAVI ISTITIMIVL SEIGVNIAPL LAGAGALGLA ISFGSQTLVK DIITGVFIQF ENGMNTGDLV TIGPLTGTVE RMSIRSVGVR QDTGAYHIIP WSSITTFANF VRGIGSVVAN YDVDRHEDAD KANQALKDAV AELMENEEIR GLIIGEPNFA GIVGLSNTAF TLRVSFTTLP LKQWTVRFAL DSQVKKHFDL AGVRAPVQTY QVLPAPGATP AEPLPPGEPT L
|
| |