Gene ECH74115_0942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_0942 
Symbol 
ID6968925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp952977 
End bp954713 
Gene Length1737 bp 
Protein Length578 aa 
Translation table11 
GC content56% 
IMG OID643384963 
ProductABC transporter, ATP-binding protein 
Protein accessionYP_002269463 
Protein GI209398784 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGATG CCGTTATCAC GCTGAACGGC CTGGAAAAAC GCTTTCCGGG CATGGACAAG 
CCCGCCGTCG CGCCGCTCGA TTGCACCATT CATGCCGGTT ATGTGACGGG GCTGGTAGGG
CCAGACGGTG CGGGTAAAAC CACGCTGATG CGGATGCTGG CGGGATTACT GAAACCCGAC
AGCGGCAATG CCACGGTGAT TGGCTTTGAT CCGATCAAAA ACGACGGCGC GCTGCACGCC
GTGCTCGGCT ATATGCCGCA GAAATTCGGC CTGTATGAAG ATCTGACGGT GATGGAGAAC
CTCAATCTGT ACGCGGATTT GCGCAGCGTC ACCGGCGAGG CACGGAAGCA GACTTTTGCT
CGCCTGCTGG AGTTTACGTC TCTTGGCCCG TTTACCGGAC GCCTGGCGGG CAAGCTCTCC
GGTGGGATGA AACAAAAACT CGGCCTGGCC TGTACCCTGG TGGGCGAACC GAAAGTGTTG
CTGCTCGATG AACCCGGCGT CGGCGTTGAC CCTATCTCAC GGCGCGAACT GTGGCAGATG
GTGCATGAGC TGGCGGGCGA AGGGATGTTA ATCCTCTGGA GTACCTCGTA TCTCGACGAA
GCCGAGCAGT GCCGTGACGT GTTACTGATG AACGAAGGCG AGTTGCTGTA TCAGGGAGAA
CCAAAAGCCC TGACACAAAC CATGGCCGGA CGCAGCTTTC TGATGACCAG TCCACACGAG
GGCAACCGCA AACTGTTGCA ACGCGCCTTG AAACTGCCGC AGGTCAGCGA CGGCATGATT
CAGGGGAAAT CGGTACGTCT GATCCTCAAA AAAGAGGCCA CACCAGACGA TATTCGCCAT
GCCGACGGGA TGCCGGAAAT CAACATCAAC GAAACTACGC CGCGTTTTGA AGATGCGTTT
ATTGATTTGC TGGGCGGTGC CGGAACCTCA GAATCGCCGC TGGGTGCAAT ATTGCATACG
GTAGAAGGCA CACCCGGCGA GACGGTGATC GAAGCGAAAG AACTGACCAA GAAATTTGGT
GATTTTGCCG CCACCGATCA CGTCAACTTT GCCGTTAAAC GCGGGGAGAT TTTTGGTTTG
CTGGGGCCAA ACGGCGCGGG CAAATCGACC ACCTTTAAGA TGATGTGCGG TTTGCTGGTG
CCGACTTCCG GCCAGGCGCT GGTGCTGGGG ATGGATCTGA AAGAGAGTTC CGGTAAAGCG
CGCCAGCATC TCGGCTATAT GGCGCAAAAA TTTTCGCTCT ACGGCAACCT GACGGTCGAA
CAGAATTTAC GCTTTTTCTC TGGTGTGTAT GGCTTACGCG GTCGGGCGCA GAACGAAAAA
ATCTCCCGTA TGAGCGAGGC ATTTGGCCTG AAAAGTATTG CCTCACACGC CACCGATGAA
CTGCCATTAG GTTTTAAACA GCGGCTGGCG CTGGCCTGTT CGCTGATGCA TGAACCGGAT
ATTCTGTTTC TCGACGAACC GACTTCCGGC GTTGACCCCC TCACCCGCCG TGAATTCTGG
CTGCACATCA ACAGCATGGT AGAGAAAGGC GTCACGGTGA TGGTCACCAC CCACTTTATG
GATGAAGCGG AATATTGCGA CCGCATCGGC CTGGTGTACC GCGGGAAATT AATCGCCAGC
GGCACGCCGG ACGATTTGAA AGCACAGTCG GCTAACGATG AGCAACCCGA TCCCACCATG
GAGCAAGCCT TTATTCAGTT GATCCACGAC TGGGATAAGG AGCATAGCAA TGAGTAA
 
Protein sequence
MNDAVITLNG LEKRFPGMDK PAVAPLDCTI HAGYVTGLVG PDGAGKTTLM RMLAGLLKPD 
SGNATVIGFD PIKNDGALHA VLGYMPQKFG LYEDLTVMEN LNLYADLRSV TGEARKQTFA
RLLEFTSLGP FTGRLAGKLS GGMKQKLGLA CTLVGEPKVL LLDEPGVGVD PISRRELWQM
VHELAGEGML ILWSTSYLDE AEQCRDVLLM NEGELLYQGE PKALTQTMAG RSFLMTSPHE
GNRKLLQRAL KLPQVSDGMI QGKSVRLILK KEATPDDIRH ADGMPEININ ETTPRFEDAF
IDLLGGAGTS ESPLGAILHT VEGTPGETVI EAKELTKKFG DFAATDHVNF AVKRGEIFGL
LGPNGAGKST TFKMMCGLLV PTSGQALVLG MDLKESSGKA RQHLGYMAQK FSLYGNLTVE
QNLRFFSGVY GLRGRAQNEK ISRMSEAFGL KSIASHATDE LPLGFKQRLA LACSLMHEPD
ILFLDEPTSG VDPLTRREFW LHINSMVEKG VTVMVTTHFM DEAEYCDRIG LVYRGKLIAS
GTPDDLKAQS ANDEQPDPTM EQAFIQLIHD WDKEHSNE