Gene ECH74115_0941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_0941 
Symbol 
ID6971365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp951851 
End bp952984 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content55% 
IMG OID643384962 
ProductABC-2 type transporter, permease protein 
Protein accessionYP_002269462 
Protein GI209397925 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.858923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAACC CGATCCTTTC CTGGCGTCGC GTGCGGGCGC TGTGCGTCAA AGAGACGCGG 
CAGATCGTTC GCGATCCGAG TAGCTGGCTG ATTGCGGTAG TGATCCCGCT GTTGCTGCTG
TTTATTTTTG GTTATGGCAT TAACCTCGAC TCCAGCAAGC TGCGGGTCGG GATTTTACTG
GAACAGCGTA GCGAAGCAGC GCTGGATTTC ACCCACACCA TGACCGGTTC GCCCTACATC
GACGCCACCA TCAGCGATAA CCGTCAGGAA CTGATCGCCA AAATGCAGGC GGGGAAAATT
CGCGGTCTGG TGGTTATTCC CGTGGATTTC GCCGAACAGA TGGAGCGCGC CAACGCTACC
GCACCGATTC AGGTGATCAC CGACGGCAGT GAGCCGAATA CCGCTAACTT TGTGCAGGGA
TATGTCGAAG GGATCTGGCA GATCTGGCAA ATGCAGCGGG CGGAGGATAA CGGGCAGACC
TTTGAGCCGC TTATTGATGT ACAAACCCGC TACTGGTTTA ACCCGGCGGC GATTAGCCAG
CACTTTATTA TCCCCGGTGC GGTGACCATC ATCATGACGG TCATCGGCGC GATTCTCACC
TCGCTGGTGG TGGCGCGAGA ATGGGAACGC GGCACTATGG AGGCTCTGCT CTCTACGGAG
ATTACCCGCA CGGAACTGCT GCTGTGTAAG CTGATCCCTT ATTACTTTCT CGGGATGCTG
GCGATGTTGC TGTGTATGCT GGTGTCAGTG TTTATTCTCG GCGTGCCGTA TCGCGGTTCG
CTGCTGATTC TGTTTTTTAT CTCCAGCCTG TTTTTACTCA GTACCCTGGG GATGGGGCTG
CTGATTTCCA CGATTACCCG CAACCAGTTC AATGCCGCTC AGGTCGCCCT GAACGCCGCG
TTCCTGCCGT CGATTATGCT TTCCGGCTTT ATTTTTCAGA TCGACAGTAT GCCCGCGGTG
ATCCGCGCGG TGACGTACAT TATTCCCGCA CGTTATTTCG TCAGCACCCT GCAAAGCCTG
TTCCTCGCCG GGAATATTCC AGTGGTGCTG GTGGTGAACG TACTGTTTTT GATCGCTTCG
GCGGTGATGT TTATCGGCCT GACGTGGCTG AAAACCAAAC GTCGGCTGGA TTAG
 
Protein sequence
MSNPILSWRR VRALCVKETR QIVRDPSSWL IAVVIPLLLL FIFGYGINLD SSKLRVGILL 
EQRSEAALDF THTMTGSPYI DATISDNRQE LIAKMQAGKI RGLVVIPVDF AEQMERANAT
APIQVITDGS EPNTANFVQG YVEGIWQIWQ MQRAEDNGQT FEPLIDVQTR YWFNPAAISQ
HFIIPGAVTI IMTVIGAILT SLVVAREWER GTMEALLSTE ITRTELLLCK LIPYYFLGML
AMLLCMLVSV FILGVPYRGS LLILFFISSL FLLSTLGMGL LISTITRNQF NAAQVALNAA
FLPSIMLSGF IFQIDSMPAV IRAVTYIIPA RYFVSTLQSL FLAGNIPVVL VVNVLFLIAS
AVMFIGLTWL KTKRRLD