| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0924 |
|---|
| Symbol | bioF |
|---|
| ID | 6972245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 936112 |
|---|
| End bp | 937266 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643384945 |
|---|
| Product | 8-amino-7-oxononanoate synthase |
|---|
| Protein accession | YP_002269445 |
|---|
| Protein GI | 209398877 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
|---|
| TIGRFAM ID | [TIGR00858] 8-amino-7-oxononanoate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00304993 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTGGC AGGAGAAAAT CAACGCGGCG CTCGATGCGC GGCGTGCTGC CGATGCCCTG
CGTCGCCGTT ATCCAGTGGC GCAAGGAGCC GGACGCTGGC TGGTGGCGGA CGATCGCCAG
TATCTGAACT TTTCCAGTAA CGATTATTTA GGTTTAAGCC ATCATCCGCA AATTATCCGT
GCCTGGAAGC AGGGTGCGGA GCAATTTGGC GTCGGTAGCG GCGGTTCCGG TCACGTCAGC
GGTTATAGCG TTGCGCATCA GGCGCTGGAA GAAGAACTGG CCGAGTGGCT GGGCTATTCG
CGGGCACTGC TATTTATCTC TGGTTTTGCC GCTAATCAGG CGGTCATTGC CGCGATGATG
GCAAAAGAGG ACCGCATTGT CGCTGACCGG CTTAGCCATG CCTCATTGCT GGAGGCTGCC
AGTTTAAGCC CGTCGCAGCT TCGCCGTTTT GTTCATAACG ATGTCACTCA TCTGGCGCGA
CTGCTTGCTT CCCCCTGTCC GGGGCAGCAA CTGGTGGTGA CAGAAGGCGT GTTCAGCATG
GACGGCGATA GTGCGCCACT GGCGGAAATC CAGCAGGTAA CGCAACAGCA CAATGGCTGG
TTGATGGTCG ATGATGCCCA CGGCACGGGC GTTATCGGGG AGCAGGGGCG CGGCACCTGC
TGGTTGCAAA AGGTAAAACC AGAATTGCTG GTAGTGACTT TTGGCAAAGG ATTTGGCGTC
AGCGGGGCTG CGGTGCTTTG CTCCAGTACG GTGGCGGATT ATCTGCTGCA ATTCGCCCGC
CATCTTATCT ACAGCACCAG TATGCCGCCC GCTCAGGCGC AGGCATTACG TGCGTCACTG
GCGGTCATTC GCAGTGATGA GGGTGATGCA CGGCGCGAAA AACTGGCGGC ACTCATTACG
CGTTTTCGTG CCGGAGTACA GGATTTGCCG TTTACGCTTG CTGATTCATG CAGCGCCATC
CAGCCATTGA TCGTCGGTGA TAACAGCCGT GCGTTACAAC TGGCAGAAAA ACTGCGCCAG
CAAGGCTGCT GGGTCACGGC GATTCGCCCG CCAACCGTAC CCTCTGGTAC TGCGCGACTG
CGCTTAACGC TAACCGCCGC GCATGAAATG CAGGATATCG ACCGTCTGCT GGAGGTGCTG
CATGGCAACG GTTAA
|
|---|
| Protein sequence | MSWQEKINAA LDARRAADAL RRRYPVAQGA GRWLVADDRQ YLNFSSNDYL GLSHHPQIIR
AWKQGAEQFG VGSGGSGHVS GYSVAHQALE EELAEWLGYS RALLFISGFA ANQAVIAAMM
AKEDRIVADR LSHASLLEAA SLSPSQLRRF VHNDVTHLAR LLASPCPGQQ LVVTEGVFSM
DGDSAPLAEI QQVTQQHNGW LMVDDAHGTG VIGEQGRGTC WLQKVKPELL VVTFGKGFGV
SGAAVLCSST VADYLLQFAR HLIYSTSMPP AQAQALRASL AVIRSDEGDA RREKLAALIT
RFRAGVQDLP FTLADSCSAI QPLIVGDNSR ALQLAEKLRQ QGCWVTAIRP PTVPSGTARL
RLTLTAAHEM QDIDRLLEVL HGNG
|
|---|
| |