Gene ECH74115_0887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_0887 
Symbol 
ID6971240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp901255 
End bp902214 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content39% 
IMG OID643384912 
Productputative outer membrane protein 
Protein accessionYP_002269412 
Protein GI209400829 
COG category[S] Function unknown 
COG ID[COG3528] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA GTGTCATCGC TGGCGTCTTT ATTGCTCTGT CATTTACCAC GTGTTCAGCT 
ATCGCGAACA GCCTTGCATT ATCATTAGCA AATGATGATG CAGGGAAGTT TCAACCAATA
CTTAATGATA TTTATGGCAA TAAACATGAA AACAGAGATG ATTACTCACA AGGCTTATTT
CTGGGATATA GCCACGATAT CTCAGACTCG AGCCAATTAT CTCTCCATAT TGCGCAAGAT
ATTTACTCTC CATCAGGCAG TAATAAAAGA CACAACACAG CTGTAACTGG AGACAGAGCT
TTTAGTGCAT ACACTCACAC TGGTATTGAA TGGAACTCCC TTGCGAATGA CTGGATTCGC
TATCGATTAG GTACTGACAT AGGTGTTGTT GGCCCCGACG CAGGCGGTCA GAAAGTACAA
AATAAAGCTC ATGAGATTAT TGGGGCAGAA AAATATCATG CATGGGATGA TCAAATAGAG
AATCGCTACG GTTATACTGT AAAAGGGATG CTATCCATGA CACCAAGTAT GGATATTTTA
GGTGCTAATG TTGGATTATA CCCTGAAGTT TCTGCTGTTA CTGGAAACTT ATTTCAATAT
GTAGCATATG GCGCAACCAT TGCCATTGGT AATGATAAAA CCTTCAATTC GGATAATGGC
TTTGGTCTGC TGGCTCCCCG TGGTTTAATG CATATGTCCG ATACAAGCGG ATTCAAATAC
AAGATTTTTG CAGGTATGGA AAGACGAGAT GTCAATCGCA ACTATACTCT CGAAGGAAAA
ACAATACAGA CGAAACAAAC AACAGTATCG CTAAACAAAA CTGTTGATGA ATATCAAGTT
GGCGCAACAA TTGGGTATGC ACCTGTAGCC TTCACACTAG CATTTAATAA AGTAACATCA
GAATTCAAGA CAGGGGATGA CTATTCATTT ATAAATGGAG CAATCACCTT CTTTTTTTAA
 
Protein sequence
MKKSVIAGVF IALSFTTCSA IANSLALSLA NDDAGKFQPI LNDIYGNKHE NRDDYSQGLF 
LGYSHDISDS SQLSLHIAQD IYSPSGSNKR HNTAVTGDRA FSAYTHTGIE WNSLANDWIR
YRLGTDIGVV GPDAGGQKVQ NKAHEIIGAE KYHAWDDQIE NRYGYTVKGM LSMTPSMDIL
GANVGLYPEV SAVTGNLFQY VAYGATIAIG NDKTFNSDNG FGLLAPRGLM HMSDTSGFKY
KIFAGMERRD VNRNYTLEGK TIQTKQTTVS LNKTVDEYQV GATIGYAPVA FTLAFNKVTS
EFKTGDDYSF INGAITFFF