| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0871 |
|---|
| Symbol | |
|---|
| ID | 6968387 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 886856 |
|---|
| End bp | 887809 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 643384896 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_002269396 |
|---|
| Protein GI | 209396612 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCATG AATTATCAAG TATGAAGGCA TTTGTCATAC TGGCAGAGTC CAGTTCATTT
AACAATGCCG CTAAATTACT CAATATTACG CAACCTGCAT TAACACGAAG AATAAAAAAG
ATGGAGGAAG ATTTACATAT TCAACTATTT GAGCGTACAA CTCGCAAGGT TACGTTAACA
AAAGCAGGAA AAAGGTTGCT CCCAGAGGCG CGGGAATTAA TAAAGAAATT CGATGAAACG
CTTTTTAATA TTCGTGATAT GAATGCTTAT CATCGTGGTA TGGTGACGTT AGCGTGTATT
CCGACCGCAG TATTTTATTT TTTACCGCTG GCAATCGGTA AATTTAATGA GCTGTATCCC
AATATTAAAG TGCGGATTCT GGAACAAGGC ACGAATAATT GCATGGAATC GGTGCTGTGT
AACGAATCAG ACTTTGGCAT AAACATGAAC AACGTCACAA ATTCATCCAT TGATTTTACC
CCACTGGTCA ACGAGCCGTT CGTGCTGGCC TGTCGGCGTG ACCATCCATT GGCTAAAAAG
CAGCTTGTAG AATGGCAGGA GTTAGTGGGT TACAAAATGA TTGGCGTACG TTCCTCCAGT
GGCAACCGAT TGTTGATAGA ACAACAGCTA GCCGACAAGC CCTGGAAGCT GGACTGGTTT
TACGAAGTGC GTCATCTTTC GACGTCATTA GGACTGGTAG AGGCGGGACT GGGAATTTCG
GCGCTTCCTG GTCTGGCAAT GCCCCATGCG CCCTATTCTT CTATTATTGG TATCCCACTG
GTGGAACCCG TTATACGTCG GACATTGGGG ATTATTCGCC GCAAAGATGC CGTGCTTTCT
CCGGCAGCAG AACGCTTTTT TGCCTTGCTG ATTAATTTGT GGACTGACGA TAAAGACAAT
TTGTGGACCA ATATCGTCGA ACGCCAGAGA CATGCGTTAC AGGAGATAGG TTAA
|
|---|
| Protein sequence | MKHELSSMKA FVILAESSSF NNAAKLLNIT QPALTRRIKK MEEDLHIQLF ERTTRKVTLT
KAGKRLLPEA RELIKKFDET LFNIRDMNAY HRGMVTLACI PTAVFYFLPL AIGKFNELYP
NIKVRILEQG TNNCMESVLC NESDFGINMN NVTNSSIDFT PLVNEPFVLA CRRDHPLAKK
QLVEWQELVG YKMIGVRSSS GNRLLIEQQL ADKPWKLDWF YEVRHLSTSL GLVEAGLGIS
ALPGLAMPHA PYSSIIGIPL VEPVIRRTLG IIRRKDAVLS PAAERFFALL INLWTDDKDN
LWTNIVERQR HALQEIG
|
|---|
| |