Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_0843 |
Symbol | tolB |
ID | 6971245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 865526 |
End bp | 866818 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643384868 |
Product | translocation protein TolB |
Protein accession | YP_002269374 |
Protein GI | 209399861 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000968933 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCAGG CATTACGAGT AGCATTTGGT TTTCTCATAC TGTGGGCATC AGTTCTGCAT GCTGAAGTCC GCATTGTGAT CGACAGCGGT GTAGATTCCG GTCGTCCTAT TGGAGTTGTT CCTTTCCAGT GGGCGGGCCC TGGTGCGGCA CCTGAAGATA TTGGCGGCAT CGTTGCTGCC GACTTGCGTA ACAGCGGTAA ATTTAATCCG TTAGATCGCG CTCGTCTGCC ACAGCAGCCG GGTAGTGCGC AGGAAGTACA ACCAGCTGCA TGGTCCGCGC TGGGTATTGA CGCTGTAGTT GTCGGTCAGG TCACTCCGAA TCCGGATGGT TCTTACAATG TTGCTTATCA ACTTGTTGAC ACTGGCGGCG CACCGGGTAC TGTACTTGCT CAGAACTCGT ACAAAGTGAA CAAGCAGTGG CTGCGTTATG CTGGTCATAC CGCCAGTGAT GAAGTGTTTG AAAAACTGAC CGGTATTAAA GGTGCGTTCC GTACCCGTAT TGCCTACGTT GTTCAGACCA ACGGCGGTCA GTTCCCGTAT GAACTGCGCG TATCTGACTA TGACGGTTAC AACCAGTTTG TCGTTCACCG TTCACCACAG CCGCTGATGT CCCCGGCGTG GTCACCAGAC GGTTCTAAAC TGGCTTATGT GACCTTCGAA AGCGGTCGTT CCGCGCTGGT TATACAAACG CTGGCAAACG GCGCTGTACG TCAGGTGGCT TCATTCCCGC GTCACAACGG TGCGCCTGCA TTCTCGCCAG ACGGCAGCAA ACTGGCATTC GCCTTGTCGA AAACCGGTAG CCTGAACCTG TACGTAATGG ATTTGGCTTC TGGTCAGATC CGCCAGGTGA CTGATGGTCG CAGTAACAAT ACCGAACCGA CCTGGTTCCC GGACAGCCAG AACCTGGCAT TTACTTCTGA CCAGGCCGGT CGTCCACAGG TTTATAAAGT GAATATCAAC GGCGGTGCGC CACAACGTAT TACCTGGGAA GGTTCGCAGA ACCAGGATGC GGATGTCAGC AGCGACGGTA AATTTATGGT AATGGTCAGC TCCAATGGTG GGCAGCAGCA CATTGCCAAA CAAGATCTGG CAACGGGAGG CGTACAAGTT CTGTCGTCCA CGTTCCTGGA TGAAACGCCA AGTCTGGCAC CTAACGGCAC TATGGTAATC TACAGCTCTT CTCAGGGGAT GGGATCCGTG CTGAATTTGG TTTCTACAGA TGGGCGTTTC AAAGCGCGTC TTCCGGCAAC TGATGGACAG GTCAAATTCC CTGCCTGGTC GCCGTATCTG TGA
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Protein sequence | MKQALRVAFG FLILWASVLH AEVRIVIDSG VDSGRPIGVV PFQWAGPGAA PEDIGGIVAA DLRNSGKFNP LDRARLPQQP GSAQEVQPAA WSALGIDAVV VGQVTPNPDG SYNVAYQLVD TGGAPGTVLA QNSYKVNKQW LRYAGHTASD EVFEKLTGIK GAFRTRIAYV VQTNGGQFPY ELRVSDYDGY NQFVVHRSPQ PLMSPAWSPD GSKLAYVTFE SGRSALVIQT LANGAVRQVA SFPRHNGAPA FSPDGSKLAF ALSKTGSLNL YVMDLASGQI RQVTDGRSNN TEPTWFPDSQ NLAFTSDQAG RPQVYKVNIN GGAPQRITWE GSQNQDADVS SDGKFMVMVS SNGGQQHIAK QDLATGGVQV LSSTFLDETP SLAPNGTMVI YSSSQGMGSV LNLVSTDGRF KARLPATDGQ VKFPAWSPYL
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