Gene ECH74115_0825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_0825 
Symbol 
ID6970843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand- 
Start bp847002 
End bp848654 
Gene Length1653 bp 
Protein Length550 aa 
Translation table11 
GC content49% 
IMG OID643384850 
Producthydro-lyase, Fe-S type, tartrate/fumarate family 
Protein accessionYP_002269356 
Protein GI209400924 
COG category[C] Energy production and conversion 
COG ID[COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain 
TIGRFAM ID[TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAAC CATTTATCTG GCAAGAACCG TTTCTACAAA ATAAAGACGG TACAGAATAT 
ACATTAATTA GCGATCAACA TATTACAGTA ACGGAATTAG ACGGCGAAGA AGTGATAAAA 
ATCGCTCCTG AAGCATTAAC GCTGCTTGCC CGGCAGGCAT TTTATGAAGC CTCTTTTTTC 
TTACGTTCCG CTCATTTGCA ACAGGTCGCC AGCATTCTTA ACGATCAGCA GGCCAGCAGT 
AATGATAAAT ACGTTGCGTT GCAGTTATTA CGTAATGCTG AAGTCTCAGC AAAAGGGGTA 
TTACCCAACT GTCAGGATAC CGGCACCGCA ACTATTGTTG CCAGTAAAGG GCAACAGATA 
TGGACCGGAG GTAACGACGC CGAAGCCTTA AGTAAAGGCA TTTACAGTAC TTTCCAGGAA 
AATAATCTGC GCTTTTCACA AAATGCGCCG CTGGATATGT ATACCGAAGT CAATACGCAA 
ACCAATCTCC CGGCGCAGAT TGATATCAGC GCTGTCGCTG GTGATGAGTA CCATTTTCTC 
TGTGTTAATA AAGGGGGCGG CTCCGCCAAT AAAGCCGCGC TTTATCAGGA AACCAAATCC 
TTATTGCAAC CAGAAAAACT GACCGCATTT TTAATCGAAA AAATGAAATC GCTGGGCACC 
GCTGCCTGCC CGCCTTACCA CATCGCCTTT GTCGTCGGAG GGCTTTCAGC CGATCAAACC 
TTAAAAATTG CCAAGCTGGC CTCAACGAAA TATTACGACA ATTTGCCCAC CAGCGGAAAC 
GAGCAGGGAC AAGCATTCCG TGATATTGAG CTGGAAAAAG TGTTGCTCGA GGCCAGTCAG 
CAATTTGGTA TTGGTGCGCA ATTTGGGGGT AAATATTTCG CTCATGATAT TCGCGTCATT 
CGTCTGCCGC GTCACGGTGG CTCTTGCCCG ATAGCTATGG CGCTCTCCTG TTCTGCCGAT 
CGCAATATCA AAGCAAAAAT TAACAAACAC GGTATCTGGC TGGAAAAACT CGAACACAAT 
CCGGGGCAAT ATATTCCAGC CTCACTGCGG GAAGAAAATC ACGCGCAACA TGTACAACTG 
GATCTAAACC GTCCGTTGCG TGACGTGATG CAGGATCTCG CCAGATTACC AGTAGGCACC 
CGCGTGTCGT TAAGTGGTCC CATCGTAGTG GCGCGCGATA TCGCCCACGC CAAAATAAAA 
GCGCGGCTGG ATAGCGGCGA ACCGATGCCG GAGTACCTGA AGCATCATAT TGTCTATTAC 
GCTGGCCCGG CGAAAACACC GGAGAACATG GCCTGCGGTT CACTGGGTCC AACCACGGGC 
GGTCGAATGG ACGGTTATAT CGATACCTTC CAGGCGGCTG GCGGCAGTCT AGTGATGTTA 
TCGAAAGGTA ACCGCAGCCA GCAGGTCACC GATGCCTGTC ACAAACATGG CGGCTTCAAT 
CTGGGAAGTA TTGGCGGTGC AGCTGCGTTA CTGGCGCAAG AATATGTCAA AAGTCTGCGT 
TGCCTGGAAT ACCCGGAGCT GGGTATGGAA GCGGTGTGGA TGATGGAAGT GGAAAATCTG 
CCCGCATTCA TCCTGGTAGA TGATAAAGGC AATAATTTCT TTAGTCAGTT TGAGCAGCAA 
CACCGCTGCG CCAGTTGCCC TGCGGGACAT TAA
 
Protein sequence
MSKPFIWQEP FLQNKDGTEY TLISDQHITV TELDGEEVIK IAPEALTLLA RQAFYEASFF 
LRSAHLQQVA SILNDQQASS NDKYVALQLL RNAEVSAKGV LPNCQDTGTA TIVASKGQQI 
WTGGNDAEAL SKGIYSTFQE NNLRFSQNAP LDMYTEVNTQ TNLPAQIDIS AVAGDEYHFL 
CVNKGGGSAN KAALYQETKS LLQPEKLTAF LIEKMKSLGT AACPPYHIAF VVGGLSADQT 
LKIAKLASTK YYDNLPTSGN EQGQAFRDIE LEKVLLEASQ QFGIGAQFGG KYFAHDIRVI 
RLPRHGGSCP IAMALSCSAD RNIKAKINKH GIWLEKLEHN PGQYIPASLR EENHAQHVQL 
DLNRPLRDVM QDLARLPVGT RVSLSGPIVV ARDIAHAKIK ARLDSGEPMP EYLKHHIVYY 
AGPAKTPENM ACGSLGPTTG GRMDGYIDTF QAAGGSLVML SKGNRSQQVT DACHKHGGFN 
LGSIGGAAAL LAQEYVKSLR CLEYPELGME AVWMMEVENL PAFILVDDKG NNFFSQFEQQ 
HRCASCPAGH