| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0819 |
|---|
| Symbol | sucB |
|---|
| ID | 6970520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 841438 |
|---|
| End bp | 842655 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643384844 |
|---|
| Product | dihydrolipoamide succinyltransferase |
|---|
| Protein accession | YP_002269350 |
|---|
| Protein GI | 209397255 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGCG TAGATATTCT GGTCCCTGAC CTGCCTGAAT CCGTAGCCGA TGCCACCGTC
GCAACCTGGC ATAAAAAACC CGGTGACGCA GTCGTACGTG ATGAAGTGCT GGTAGAAATC
GAAACTGACA AAGTGGTACT GGAAGTACCG GCATCAGCAG ACGGCATTCT GGATGCGGTT
CTGGAAGATG AAGGTACAAC GGTAACGTCT CGTCAGATCC TTGGTCGCCT GCGTGAAGGC
AACAGCGCCG GTAAAGAAAC CAGCGCCAAA TCTGAAGAGA AAGCGTCCAC TCCGGCGCAA
CGCCAGCAGG CGTCTCTGGA AGAGCAAAAC AACGATGCGT TAAGCCCGGC GATCCGTCGC
CTGCTGGCTG AACATAACCT CGACGCCAGC GCCATTAAAG GCACCGGTGT GGGTGGTCGT
CTGACCCGTG AAGATGTGGA AAAACATCTG GCGAAAGCTC CGGCGAAAGA GTCTGCACCG
GCAGCGGCTG CTCCGGCGGC GCAACCGGCT CTGGCTGCAC GTAGCGAAAA ACGTGTCCCG
ATGACTCGCC TGCGTAAGCG TGTGGCAGAG CGTCTGCTGG AAGCGAAAAA CTCCACCGCC
ATGCTGACCA CGTTCAACGA AGTCAACATG AAGCCGATTA TGGATCTGCG TAAGCAGTAC
GGTGAAGCGT TTGAAAAACG CCACGGCATC CGTCTGGGCT TTATGTCCTT CTACGTGAAA
GCGGTGGTTG AAGCCCTGAA ACGTTACCCG GAAGTGAATG CTTCTATCGA CGGCGATGAC
GTGGTTTACC ACAACTATTT CGACGTCAGC ATGGCGGTTT CTACGCCGCG CGGCCTGGTG
ACGCCGGTAC TGCGTGATGT CGATACCCTC GGCATGGCAG ACATCGAGAA GAAAATCAAA
GAGCTGGCAG TTAAAGGCCG TGACGGCAAG CTGACGGTTG AAGATCTGAC CGGTGGTAAC
TTCACCATCA CCAACGGTGG TGTGTTCGGT TCCCTGATGT CTACGCCGAT CATCAACCCG
CCGCAGAGCG CAATTCTGGG TATGCACGCT ATCAAAGATC GTCCGATGGC TGTGAATGGT
CAGGTTGAGA TCCTGCCGAT GATGTACCTG GCGCTGTCCT ACGATCACCG TCTGATCGAT
GGTCGCGAAT CCGTGGGCTT CCTGGTAACG ATCAAAGAGT TGCTGGAAGA TCCGACGCGT
CTGCTGCTGG ACGTGTAG
|
|---|
| Protein sequence | MSSVDILVPD LPESVADATV ATWHKKPGDA VVRDEVLVEI ETDKVVLEVP ASADGILDAV
LEDEGTTVTS RQILGRLREG NSAGKETSAK SEEKASTPAQ RQQASLEEQN NDALSPAIRR
LLAEHNLDAS AIKGTGVGGR LTREDVEKHL AKAPAKESAP AAAAPAAQPA LAARSEKRVP
MTRLRKRVAE RLLEAKNSTA MLTTFNEVNM KPIMDLRKQY GEAFEKRHGI RLGFMSFYVK
AVVEALKRYP EVNASIDGDD VVYHNYFDVS MAVSTPRGLV TPVLRDVDTL GMADIEKKIK
ELAVKGRDGK LTVEDLTGGN FTITNGGVFG SLMSTPIINP PQSAILGMHA IKDRPMAVNG
QVEILPMMYL ALSYDHRLID GRESVGFLVT IKELLEDPTR LLLDV
|
|---|
| |