| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0816 |
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| Symbol | sdhB |
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| ID | 6970437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 837605 |
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| End bp | 838321 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643384841 |
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| Product | succinate dehydrogenase iron-sulfur subunit |
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| Protein accession | YP_002269347 |
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| Protein GI | 209400050 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.715359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGACTCG AGTTTTCAAT TTATCGCTAT AACCCGGATG TTGATGATGC TCCGCGTATG
CAGGATTACA CCCTGGAAGC GGAAGAAGGT CGCGACATGA TGCTGCTGGA TGCGCTTATC
CAGCTGAAAG AGAAAGATCC CAGCCTGTCG TTCCGCCGCT CCTGCCGTGA AGGTGTGTGC
GGTTCCGACG GTCTGAACAT GAACGGCAAG AATGGTCTGG CCTGTATTAC CCCGATTTCG
GCACTCAACC AGCCGGGCAA GAAGATTGTG ATTCGCCCGC TGCCAGGTTT ACCGGTGATC
CGCGATTTGG TGGTAGACAT GGGACAATTC TATGCGCAAT ATGAGAAAAT TAAGCCTTAC
CTGTTGAATA ATGGACAAAA TCCGCCAGCT CGCGAGCATT TACAGATGCC AGAGCAGCGC
GAAAAACTCG ACGGGCTGTA TGAATGTATT CTCTGCGCAT GTTGTTCAAC CTCTTGTCCG
TCTTTCTGGT GGAATCCCGA TAAGTTTATC GGCCCGGCAG GCTTGTTAGC GGCATATCGT
TTCCTGATCG ATAGCCGTGA TACCGAGACT GACAGCCGCC TCGACGGTTT GAGCGATGCA
TTCAGTGTAT TCCGCTGTCA TAGCATCATG AACTGCGTCA GTGTATGTCC GAAGGGGCTG
AACCCGACGC GCGCCATCGG CCATATCAAG TCGATGTTGT TGCAACGTAA TGCGTAA
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| Protein sequence | MRLEFSIYRY NPDVDDAPRM QDYTLEAEEG RDMMLLDALI QLKEKDPSLS FRRSCREGVC
GSDGLNMNGK NGLACITPIS ALNQPGKKIV IRPLPGLPVI RDLVVDMGQF YAQYEKIKPY
LLNNGQNPPA REHLQMPEQR EKLDGLYECI LCACCSTSCP SFWWNPDKFI GPAGLLAAYR
FLIDSRDTET DSRLDGLSDA FSVFRCHSIM NCVSVCPKGL NPTRAIGHIK SMLLQRNA
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