| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0810 |
|---|
| Symbol | gltA |
|---|
| ID | 6971997 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 833101 |
|---|
| End bp | 834384 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643384836 |
|---|
| Product | type II citrate synthase |
|---|
| Protein accession | YP_002269342 |
|---|
| Protein GI | 209396333 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0372] Citrate synthase |
|---|
| TIGRFAM ID | [TIGR01798] citrate synthase I (hexameric type) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.659455 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGATA CAAAAGCAAA ACTCACCCTC AACGGGGACA CAGCTGTTGA ACTGGATGTG
CTGAAAGGCA CGCTGGGTCA AGATGTTATT GATATCCGTA CTCTCGGTTC AAAAGGTGTG
TTCACCTTTG ACCCTGGCTT CACTTCAACC GCATCCTGCG AATCTAAAAT TACTTTTATT
GATGGTGATG AAGGTATTTT GCTGCACCGC GGTTTCCCGA TCGATCAGCT GGCGACCGAT
TCTAACTACC TGGAAGTTTG TTACATCCTG CTGAATGGTG AAAAACCGAC TCAGGAACAG
TATGACGAAT TTAAAACTAC GGTGACCCGT CATACCATGA TCCACGAGCA GATTACCCGT
CTGTTCCACG CTTTCCGTCG CGACTCACAT CCAATGGCAG TCATGTGTGG TATTACCGGC
GCGCTGGCGG CGTTCTATCA CGACTCGCTG GATGTTAACA ATCCTCGTCA TCGTGAAATT
GCCGCGTTCC GCCTGCTGTC GAAAATGCCG ACCATGGCAG CGATGTGTTA CAAGTATTCC
ATTGGTCAGC CATTTGTTTA TCCGCGCAAC GATCTCTCCT ATGCCGGTAA CTTCCTGAAT
ATGATGTTCT CCACGCCGTG CGAACCGTAT GAAGTTAATC CGATTCTGGA ACGTGCTATG
GACCGTATTC TGATCCTGCA CGCTGACCAT GAACAGAACG CCTCTACCTC CACCGTGCGT
ACCGCTGGCT CTTCGGGTGC GAACCCGTTT GCCTGTATCG CAGCAGGTAT TGCTTCACTG
TGGGGGCCTG CACACGGTGG TGCTAACGAA GCGGCGCTGA AAATGCTGGA AGAAATTAGC
TCCGTTAAAC ACATTCCGGA ATTTGTTCGT CGTGCGAAAG ATAAAAATGA TTCTTTCCGC
CTGATGGGCT TCGGTCACCG CGTGTACAAA AATTACGACC CGCGCGCCAC CGTAATGCGT
GAAACCTGCC ATGAAGTTCT GAAAGAGCTG GGCACCAAAG ATGACCTGCT GGAAGTGGCT
ATGGAGCTGG AAAACATCGC GCTGAACGAC CCGTACTTTA TCGAGAAGAA ACTGTACCCG
AACGTCGATT TCTACTCTGG TATCATCCTG AAAGCGATGG GTATTCCGTC TTCCATGTTC
ACCGTCATCT TCGCTATGGC CCGTACCGTT GGCTGGATCG CTCACTGGAG CGAAATGCAC
AGTGACGGCA TGAAGATCGC CCGTCCGCGC CAGTTGTACA CCGGCTATGA AAAACGAGAC
TTTAAATCAG ATGTTAAACA TTAA
|
|---|
| Protein sequence | MADTKAKLTL NGDTAVELDV LKGTLGQDVI DIRTLGSKGV FTFDPGFTST ASCESKITFI
DGDEGILLHR GFPIDQLATD SNYLEVCYIL LNGEKPTQEQ YDEFKTTVTR HTMIHEQITR
LFHAFRRDSH PMAVMCGITG ALAAFYHDSL DVNNPRHREI AAFRLLSKMP TMAAMCYKYS
IGQPFVYPRN DLSYAGNFLN MMFSTPCEPY EVNPILERAM DRILILHADH EQNASTSTVR
TAGSSGANPF ACIAAGIASL WGPAHGGANE AALKMLEEIS SVKHIPEFVR RAKDKNDSFR
LMGFGHRVYK NYDPRATVMR ETCHEVLKEL GTKDDLLEVA MELENIALND PYFIEKKLYP
NVDFYSGIIL KAMGIPSSMF TVIFAMARTV GWIAHWSEMH SDGMKIARPR QLYTGYEKRD
FKSDVKH
|
|---|
| |