| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0785 |
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| Symbol | speF |
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| ID | 6968971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 799870 |
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| End bp | 802077 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643384812 |
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| Product | ornithine decarboxylase |
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| Protein accession | YP_002269318 |
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| Protein GI | 209398410 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAA TGTCAGAATT AAAAATTGCC GTTAGTCGTT CTTGCCCGGA TTGTTTTTCC
ACTCATCGTG CATGCGTGAA TATAGACGAA AGTAATTATA TTGACGTTGC CGCCATTATT
TTATCAGTCA GTGATGTTGA ACGTGGAAAA CTCGATGAAA TAGACGCTAC TGGCTATGAC
ATTCCTGTTT TTATTGCAAC GGAAAATGAA GAACGTATAC CAGCAGAATA TCTTTCACGT
ATTTCTGGTG TCTTCGAACA TGGAGAAGCA CGCAAAGAAT TTTATGGTCG TCAGTTAGAA
ACCGCTGCCA GCCATTATGA AACTCAACTG CGCCCACCTT TCTTTCGCGC ACTGGTCGAT
TATGTCAATC AGGGCAACAG CGCATTTGAC TGCCCCGGTC ATCAGGGCGG CGAATTTTTC
CGTCGCCATC CGGCGGGGAA TCAGTTTGTG GAATACTTTG GTGAGGCGCT GTTCCGTGCC
GACTTGTGCA ACGCCGACGT AGCGATGGGC GATCTGCTGA TTCACGAAGG CGCGCCATGC
ATTGCACAGC AACATGCAGC AAAAGTGTTT AATGCCGATA AAACCTACTT CGTTTTAAAT
GGCACTTCAT CTTCTAACAA AGTGGTTTTA AACGCCCTGC TGACACCGGG TGATCTGGTG
CTATTTGACC GCAATAACCA TAAGTCTAAC CACCACGGGG CCTTGCTACA GGCTGGTGCA
ACACCGGTTT ATCTGGAAAC AGCACGTAAC CCGTATGGTT TTATCGGTGG TATTGATGCA
CACTGCTTCG AAGAAAGTTA TCTGCGTGAA CTGATTACAG AAGTTGCACC GCAACGGGCA
AAAGAGGCGC GTCCGTTCCG CCTCGCTGTG ATTCAGCTAG GCACCTACGA CGGTACGATT
TATAACGCCC GCCAGGTGGT GGATAAAATT GGTCATCTGT GTGACTACAT CCTGTTTGAT
TCCGCATGGG TCGGCTATGA ACAGTTTATT CCGATGATGG CTGACTGTTC GCCGCTGTTG
CTGGATCTTA ATGAGAACGA TCCGGGTATT CTGGTTACGC AATCCGTACA TAAACAGCAG
GCTGGTTTTT CTCAAACTTC ACAAATCCAT AAAAAAGACA GCCACATCAA AGGGCAACAG
CGTTATGTAC CGCACAAACG CATGAACAAC GCCTTTATGA TGCATGCCTC CACCAGCCCG
TTCTATCCGC TGTTTGCCGC ACTGGATATC AACGCCAAAA TGCATGAAGG TGTCAGCGGT
CGTAATATGT GGATGGATTG TGTGGTAAAT GGCATTAATG CCCGCAAACT GATCCTCGAT
AACTGTCAGC ATATTCGTCC GTTCATACCT GAACTGGTGG ATGGTAAACC CTGGCAGTCG
TATGAAACAG CGCAAATTGC GGTTGATCTG CGCTTCTTCC AGTTTGTACC AGGTGAGCAC
TGGCATTCTT TTGAAGGCTA TGCAGAGAAT CAATACTTTG TTGATCCGTG CAAACTGTTG
CTGACAACCC CAGGTATTGA TGCACGTAAC GGCGAATATG AAGCGTTCGG TGTACCCGCG
ACGATTCTTG CTAACTTCCT GCGCGAAAAT GGCGTAGTGC CGGAAAAATG CGATCTTAAC
TCCATCCTCT TCCTGCTGAC TCCGGCAGAA GATATGGCCA AACTTCAGCA ACTTGTTGCC
CTGCTGGTAC GCTTCGAAAA ACTGCTGGAA TCTGATGCGC CGCTGGCGGA AGTGCTACCT
TCCATCTACA AACAGCATGA AGAGCGCTAC GCCGGTTATA CCCTTCGTCA GTTGTGCCAG
GAAATGCATG ATTTGTATGC CCGCCACAAC GTGAAACAAC TGCAAAAAGA GATGTTCCGT
AAGGAACACT TCCCACGCGT CAGCATGAAT CCGCAAGAAG CTAACTACGC CTATTTACGC
GGTGAAGTGG AGCTGGTTCG TCTGCCGGAT GCAGAAGGCC GTATCGCTGC CGAAGGTGCG
CTTCCTTATC CTCCGGGTGT GCTGTGTGTT GTTCCGGGTG AAATCTGGGG TGGTGCTGTT
TTGCGTTACT TCAGCGCTCT GGAAGAAGGG ATCAACCTGC TGCCAGGTTT TGCACCGGAG
CTGCAGGGTG TCTATATCGA AGAACATGAT GGTCGTAAGC AAGTTTGGTG CTATGTCATC
AAGCCTCGTG ATGCGCAAAG CACCCTGCTG AAAGGGGAAA AATTATGA
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| Protein sequence | MNKMSELKIA VSRSCPDCFS THRACVNIDE SNYIDVAAII LSVSDVERGK LDEIDATGYD
IPVFIATENE ERIPAEYLSR ISGVFEHGEA RKEFYGRQLE TAASHYETQL RPPFFRALVD
YVNQGNSAFD CPGHQGGEFF RRHPAGNQFV EYFGEALFRA DLCNADVAMG DLLIHEGAPC
IAQQHAAKVF NADKTYFVLN GTSSSNKVVL NALLTPGDLV LFDRNNHKSN HHGALLQAGA
TPVYLETARN PYGFIGGIDA HCFEESYLRE LITEVAPQRA KEARPFRLAV IQLGTYDGTI
YNARQVVDKI GHLCDYILFD SAWVGYEQFI PMMADCSPLL LDLNENDPGI LVTQSVHKQQ
AGFSQTSQIH KKDSHIKGQQ RYVPHKRMNN AFMMHASTSP FYPLFAALDI NAKMHEGVSG
RNMWMDCVVN GINARKLILD NCQHIRPFIP ELVDGKPWQS YETAQIAVDL RFFQFVPGEH
WHSFEGYAEN QYFVDPCKLL LTTPGIDARN GEYEAFGVPA TILANFLREN GVVPEKCDLN
SILFLLTPAE DMAKLQQLVA LLVRFEKLLE SDAPLAEVLP SIYKQHEERY AGYTLRQLCQ
EMHDLYARHN VKQLQKEMFR KEHFPRVSMN PQEANYAYLR GEVELVRLPD AEGRIAAEGA
LPYPPGVLCV VPGEIWGGAV LRYFSALEEG INLLPGFAPE LQGVYIEEHD GRKQVWCYVI
KPRDAQSTLL KGEKL
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