Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_0741 |
Symbol | hscC |
ID | 6972157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 766358 |
End bp | 768028 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643384772 |
Product | DnaK family protein HscC |
Protein accession | YP_002269285 |
Protein GI | 209398988 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0443] Molecular chaperone |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAATG CAGAACTCGC CATTGGTATC GATCTCGGTA CTACCAATAG TTTAATTGCC GTCTGGAAAG ACGGTGCCGC GCAATTAATT CCAAATAAGT TCGGTGAATA TTTAACACCA TCCATAATTA GCATGGATGA AAATAATCAT ATTTTAGTCG GAAAACCGGC TGTATCACGG CGTACTTCGC ATCCGGATAA AACGGCAGCG TTATTTAAAC GTGCAATGGG CAGTAATACC AACTGGCGGT TAGGCAGCGA CACATTTAAC GCGCCAGAAC TGTCCTCTTT GGTATTACGC TCATTAAAAG AAGATGCCGA AGAATTTCTG CAACGTCCGA TTAAAGATGT GGTGATCTCT GTTCCGGCTT ATTTCAGCGA TGAACAACGC AAGCATACCC GTTTAGCAGC GGAGTTAGCC GGTTTAAATG CGGTACGCTT AATTAATGAA CCCACAGCAG CTGCGATGGC GTATGGCCTG CATACCCAAC AAAATACCCG TTCGCTGGTG TTTGATCTCG GTGGCGGCAC GTTTGACGTC ACGGTGCTTG AGTACGCCAC GCCGGTGATT GAAGTTCACG CCTCCGCTGG CGACAACTTC CTCGGTGGCG AAGATTTTAC CCATATGCTG GTCGATGAGG TTTTAAAACG CGCGGATGTC GCCAGGACCA CGCTTAACGA GAGTGAACTG GCAGCCTTGT ATGCCTGTGT GGAAGCGGCA AAATGTAGCA ATCAATCGCC AATACACATT CGCTGGCAGT ACCAGGATGA AACGCGGGAA TGCGAATTTT ACGAGAACGA ACTGGAAGAT TTGTGGTTGC CGCTGCTCAA TCGCTTGCGA GTGCCGATTG AACAGGCGTT GCGCGATGCG CGTCTGAAGC CGAGTCAAAT CGACAGTCTG GTGCTGGTTG GCGGCGCGTC ACAAATGCCG CTGGTGCAGC GAATCGCCGT GCGTCTGTTT GGCAAATTAC CGTATCAAAG TTACGATCCG AGCACCATTG TCGCGCTGGG CGCAGCAATC CAGGCAGCCT GCCGCTTACG CAGTGAAGAT ATTGAAGAAG TGATCCTCAC TGATATTTGC CCTTACTCGT TGGGCGTTGA GGTTAACCGC CAGGGCGTTT CCGGCATTTT CTCGCCGATT ATTGAACGAA ACACCACTGT GCCCGTGTCG CGTGTAGAAA CTTATTCAAC CATGCACCCG GAACAGGATT CTATTACGGT TAACGTCTAT CAGGGAGAAA ACCACAAAGT TAAAAACAAC ATTCTGGTGG AATCCTTCGA TGTGCCGTTG AAGAGAACCG GGGCTTATCA GTCGATTGAT ATTCGCTTTA GTTATGATAT CAACGGTTTG CTTGAAGTTG ACGTGCTTCT GGAAGACGGC AGCGTTAAGT CCAGAGTGAT TAACCACAGC CCGGTAACAT TGAGCGCGCA GCAGATTGAA GAGAGTCGGA CGCGGTTATC CGCATTGAAA ATTTATCCGC GCGATATGCT CATCAACCGC ACCTTTAAGG CCAAACTGGA AGAGTTGTGG GCGCGGGCGC TGGGTGACGA GCGAGAAGAG ATTGGCCGGG TGATCACCGA TTTTGATGCG GCGCTGCAGT CAAACGATAT GGCCCGCGTC GATGAGGTCA GGCGGCAGGC GAGCGTTTAT TTAGCCATTG AGATCCCATA A
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Protein sequence | MDNAELAIGI DLGTTNSLIA VWKDGAAQLI PNKFGEYLTP SIISMDENNH ILVGKPAVSR RTSHPDKTAA LFKRAMGSNT NWRLGSDTFN APELSSLVLR SLKEDAEEFL QRPIKDVVIS VPAYFSDEQR KHTRLAAELA GLNAVRLINE PTAAAMAYGL HTQQNTRSLV FDLGGGTFDV TVLEYATPVI EVHASAGDNF LGGEDFTHML VDEVLKRADV ARTTLNESEL AALYACVEAA KCSNQSPIHI RWQYQDETRE CEFYENELED LWLPLLNRLR VPIEQALRDA RLKPSQIDSL VLVGGASQMP LVQRIAVRLF GKLPYQSYDP STIVALGAAI QAACRLRSED IEEVILTDIC PYSLGVEVNR QGVSGIFSPI IERNTTVPVS RVETYSTMHP EQDSITVNVY QGENHKVKNN ILVESFDVPL KRTGAYQSID IRFSYDINGL LEVDVLLEDG SVKSRVINHS PVTLSAQQIE ESRTRLSALK IYPRDMLINR TFKAKLEELW ARALGDEREE IGRVITDFDA ALQSNDMARV DEVRRQASVY LAIEIP
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