| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0712 |
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| Symbol | cspE |
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| ID | 6971399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 741922 |
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| End bp | 742131 |
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| Gene Length | 210 bp |
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| Protein Length | 69 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643384746 |
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| Product | cold shock protein CspE |
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| Protein accession | YP_002269259 |
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| Protein GI | 209399192 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0018015 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTAAGA TTAAAGGTAA CGTTAAGTGG TTTAATGAGT CCAAAGGATT CGGTTTCATT
ACTCCGGAAG ACGGCAGCAA AGACGTGTTC GTACACTTCT CTGCAATCCA GACTAATGGT
TTTAAAACTC TTGCTGAAGG TCAGCGCGTA GAGTTCGAAA TCACTAACGG TGCCAAAGGC
CCTTCTGCTG CAAACGTAAT CGCTCTGTAA
|
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| Protein sequence | MSKIKGNVKW FNESKGFGFI TPEDGSKDVF VHFSAIQTNG FKTLAEGQRV EFEITNGAKG
PSAANVIAL
|
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