Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_0703 |
Symbol | citF |
ID | 6971306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 732668 |
End bp | 734200 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643384738 |
Product | citrate lyase, alpha subunit |
Protein accession | YP_002269251 |
Protein GI | 209396876 |
COG category | [C] Energy production and conversion |
COG ID | [COG3051] Citrate lyase, alpha subunit |
TIGRFAM ID | [TIGR01584] citrate lyase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCAGA AAATTGAACA ATCTCAACGA CAAGAACGGG TAGCGGCCTG GAATCGTCGC GCTGAATGCG ATCTTGCCGC TTTCCAGAAC TCACCAAAGC AAACCTACCA GGCTGAAAAA GCGCGCGATC GCAAACTGTG CGCCAACCTG GAAGAAGCGA TTCGTCGCTC TGGTTTACAG GACGGCATGA CGGTTTCCTT CCATCACGCT TTCCGTGGCG GTGACCTGAC CGTCAATATG GTGATGGACG TCATCGCGAA GATGGGCTTT AAAAACCTGA TCCTGGCGTC CAGCTCCCTG AGTGATTGCC ATGCGCCGCT GGTAGAACAC ATTCGCCAGG GCGTGGTTAC CCGCATTTAT ACCTCCGGCC TGCGTGGTCC ACTGGCGGAA GAGATCTCCC GTGGTCTGCT GGCGGAACCG GTGCAAATCC ACTCTCACGG CGGACGTGTG CATCTGGTAC AGAGCGGCGA ACTGAATATC GACGTGGCTT TCCTCGGCGT CCCGTCCTGT GATGAATTCG GTAATGCCAA CGGCTACACC GGTAAAGCCT GCTGCGGCTC CCTCGGCTAT GCAATGGTTG ATGCCGACAA CGCAAAACAG GTTGTGATGC TTACCGAAGA ACTGCTGCCT TATCCGCATA ATCCGGCAAG CATTGAGCAA GATCAGGTTG ATTTAATCGT CAAAGTTGAT CGCGTTGGCG ATGCTGCAAA AATCGGCGCT GGTGCTACCC GTATGACCAC TAACCCGCGC GAACTGCTTA TTGCCCGTAG CGCTGCGGAT GTGATTGTCA ACTCAGGCTA CTTCAAAGAA GGTTTCTCCA TGCAAACCGG CACCGGCGGC GCATCGCTGG CGGTAACCCT TTTCCTGGAA GACAAAATGC GTAGCCGCGA TATTCGCGCC GACTTCGCCC TCGGTGGTAT TACCGCGACG ATGGTTGATC TGCACGAAAA AGGTCTGATC CGCAAACTGC TGGATGTACA GAGCTTTGAC AGCCACGCTG CGCAATCGCT GGCCCGTAAC CCCAATCACA TCGAAATCAG CGCCAACCAG TACGCTAACT GGGGTTCGAA AGGTGCATCG GTTGATCGTC TCGACGTGGT GGTACTGAGC GCGCTGGAAA TTGACACCCA GTTCAACGTT AACGTGCTGA CCGGCTCTGA CGGCGTACTG CGTGGTGCTT CCGGTGGTCA CTGCGATACC GCGATTGCCT CTGCGCTTTC CATCATCGTC GCGCCGCTGG TACGCGGTCG TATTCCGACT CTGGTGGATA ACGTGCTGAC CTGCATCACC CCGGGCTCCA GTGTCGATAT TCTGGTCACA GACCACGGTA TCGCAGTTAA CCCGGCACGT CCGGAACTGG CAGAACGTCT GCAGGAAGCG GGCATTAAAG TGGTTTCCAT TGAGTGGCTG CGCGAACGTG CGCGTCTGCT GACCGGTGAA CCACAGCCGA TTGAATTCAC CGACCGCGTC GTTGCCGTTG TGCGTTACCG CGATGGCTCG GTGATCGATG TTGTGCATCA GGTGAAGGAA TAA
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Protein sequence | MTQKIEQSQR QERVAAWNRR AECDLAAFQN SPKQTYQAEK ARDRKLCANL EEAIRRSGLQ DGMTVSFHHA FRGGDLTVNM VMDVIAKMGF KNLILASSSL SDCHAPLVEH IRQGVVTRIY TSGLRGPLAE EISRGLLAEP VQIHSHGGRV HLVQSGELNI DVAFLGVPSC DEFGNANGYT GKACCGSLGY AMVDADNAKQ VVMLTEELLP YPHNPASIEQ DQVDLIVKVD RVGDAAKIGA GATRMTTNPR ELLIARSAAD VIVNSGYFKE GFSMQTGTGG ASLAVTLFLE DKMRSRDIRA DFALGGITAT MVDLHEKGLI RKLLDVQSFD SHAAQSLARN PNHIEISANQ YANWGSKGAS VDRLDVVVLS ALEIDTQFNV NVLTGSDGVL RGASGGHCDT AIASALSIIV APLVRGRIPT LVDNVLTCIT PGSSVDILVT DHGIAVNPAR PELAERLQEA GIKVVSIEWL RERARLLTGE PQPIEFTDRV VAVVRYRDGS VIDVVHQVKE
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