Gene ECH74115_0653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_0653 
SymbolcusC 
ID6970337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp681535 
End bp682917 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content51% 
IMG OID643384690 
Productcopper/silver efflux system outer membrane protein CusC 
Protein accessionYP_002269203 
Protein GI209399978 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.191725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCCTT GTAAACTTCT GCCATTTTGT GTGGCCCTTG CGCTAACCGG TTGTTCACTG 
GCACCGGATT ATCAGCGCCC GGCAATGCCC GTACCGCAGC AGTTCTCACT CAGCCAGAAC
GGCCTGGTTA ACGCAGCAGA TAACTATCAG AACGCGGGCT GGCGCACCTT TTTTGTTGAT
AATCAGGTGA AGACGCTGAT TAGCGAGGCG CTGGAGAATA ACCGGGATTT GCGCATGGCG
ACGCTGAAAG TGCAGGAGGC ACGGGCGCAA TATCGTCTGA CTGATGCCGA CCGCTACCCA
CAGCTCAATG GTGAGGGCAG CGGCAGCTGG AGCGGCAATC TTAAAGGCGA TTCAGCCACG
ACGCGGGAGT TTTCTACTGG CCTTAACGCC AGCTTTGACC TCGATTTTTT CGGGCGCTTA
AAGAACATGA GCGAAGCCGA GCGACAAAAT TATTTAGCCA CTGAGGAAGC TCAGCGCGCG
GTGCATATTC TGCTGGTTTC TAATGTCGCG CAAAGCTATT TCAATCAGCA GCTGGCGTAT
GCGCAATTGC AAATAGCCGA AGAAACGCTG CGTAATTATC AGCAGTCATA TGCGTTTGTC
GAAAAACAAC TGTTGACAGG TAGCAGTAAT GTTCTGGCGC TGGAACAGGC TCGCGGGGTG
ATTGAAAGTA CCCGCAGCGA CATCGCTAAA CGTCAGGGGG AACTGGCGCA GGCGAATAAT
GCATTGCAAC TGTTACTGGG AAGCTACGGC AAGCTGCCGC AAGCGCAGAC AGTAAACAGC
GACAGCCTGC AAAGCGTTAA ATTACCGGCG GGCTTGTCGT CGCAAATCTT ATTGCAGCGC
CCGGATATTA TGGAAGCTGA ACATGCGTTA ATGGCGGCTA ATGCCAATAT TGGTGCTGCA
CGCGCGGCAT TTTTCCCGTC TATCAGCCTG ACCAGCGGAA TATCAACCGC CAGCAGCGAT
CTGTCGTCAT TATTTAACGC CAGCAGCGGG ATGTGGAATT TTATTCCTAA AATTGAGATC
CCCATTTTTA ATGCCGGACG CAACCAGGCC AATCTGGATA TCGCCGAAAT TCGCCAGCAG
CAGTCGGTAG TGAATTATGA ACAGAAAATC CAGAACGCCT TTAAAGAAGT GGCAGATGCG
CTGGCATTAC GTCAAAGCCT GAACGATCAA ATTAGCGCCC AGCAGCGTTA TCTGGCATCG
CTGCAAATTA CTTTGCAACG GGCGCGGGCA TTATATCAGC ACGGCGCAGT AAGTTATCTG
GAAGTGCTGG ATGCCGAGCG TTCTTTATTT GCAACCCGAC AAACCGTACT TGACCTGAAT
TATGCCCGTC AGGTCAACGA AATTTCTTTA TATACCGCAC TTGGTGGCGG TTGGCAGCAA
TAA
 
Protein sequence
MSPCKLLPFC VALALTGCSL APDYQRPAMP VPQQFSLSQN GLVNAADNYQ NAGWRTFFVD 
NQVKTLISEA LENNRDLRMA TLKVQEARAQ YRLTDADRYP QLNGEGSGSW SGNLKGDSAT
TREFSTGLNA SFDLDFFGRL KNMSEAERQN YLATEEAQRA VHILLVSNVA QSYFNQQLAY
AQLQIAEETL RNYQQSYAFV EKQLLTGSSN VLALEQARGV IESTRSDIAK RQGELAQANN
ALQLLLGSYG KLPQAQTVNS DSLQSVKLPA GLSSQILLQR PDIMEAEHAL MAANANIGAA
RAAFFPSISL TSGISTASSD LSSLFNASSG MWNFIPKIEI PIFNAGRNQA NLDIAEIRQQ
QSVVNYEQKI QNAFKEVADA LALRQSLNDQ ISAQQRYLAS LQITLQRARA LYQHGAVSYL
EVLDAERSLF ATRQTVLDLN YARQVNEISL YTALGGGWQQ