| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0649 |
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| Symbol | |
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| ID | 6968369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 676762 |
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| End bp | 678663 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643384686 |
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| Product | type VI secretion system Vgr family protein |
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| Protein accession | YP_002269199 |
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| Protein GI | 209397950 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.823903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAACCG GATTACGTTT CACACTGGAA GTGGACGGCC TGCCACCGGA CGCTTTTGCG
GTGGTTTCCT TTCATCTCAC CCAGTCACTC TCTTCGCTCT TTTCCCTCGA TCTCTCCTTG
GTCAGCCAGC AGTTTCTCTC CCTTGAATTT GCGCAGGTGC TGGACAAAAT GGCCTACCTG
ACAATATGGC AGGGTGATGA TGTACAGCGC CGGGTGAAAG GTGTGGTGAC CTGGTTTGAA
CTGGGGGAGA ACGACAAAAA CCAGATGCTG TACAGCATGA AGGTGCACCC GCCGCTGTGG
CGTGCCGGTC TGCGCCAGAA CTTCCGTATC TTCCAGAACG AGGACATCAA AAGCATCCTC
GGCACGATAT TGCAGGAAAA CGGGGTGACC GAGTGGAGTC CGCTGTTCAG TGAACCGCAT
CCTTCCCGTG AGTTTTGTGT CCAGTACGGT GAGACTGATT ACGATTTCCT GTGCCGGATG
GCGGCGGAGG AAGGCATCTT CTTTTATGAG GAGCATGCTT ACAAAAGTAC CGACCAGAGC
CTGGTGCTGT GCGACACGGT CCGCCATCTG CCCGAATCTT TTGAAATCCC CTGGAACCCG
AACACCCGTA CCGAGGTGAG CACCCTCTGC ATCAGCCAGT TTCGCTACAG CGCACAAATC
CGCCCTTCTT CCGTGGTGAC CAAAGACTAC ACCTTTAAAC GCCCCGGCTG GGCAGGACGT
TTTGATCAGG AAGGCCAGCA CCAGGATTAC CAGCGCACGC AGTATGAGGT GTATGACTAC
CCCGGACGTT TCAAGGGCGC CCACGGGCAG AACTTTGCCC GCTGGCAGAT GGAGGGCTGG
CGAAACAATG CAGAAACCGC GCGGGGAATG AGTCGCTCGC CGGAGATATG GCCGGGACGG
CGAATTGTGC TGACGGGGCA TCCGCAGGCG AACCTGAACC GGGAATGGCA GGTGGTGGCA
AGTGAACTGC ACGGCGAGCA GCCGCAGGCG GTGCCGGGAA GGCGGGGAGC AGGGACGGCG
CTGGAGAACC ATTTTGCGGT GATCCCGGCA GACCGGACAT GGCGACCCCA GCCGCGGCTA
AAACCGCTGG TGGACGGTCC GCAGAGCGCC GTCGTGACGG GGCCGGAGGG TGAGGAAATC
TTCTGTGATG AACATGGCCG AGTGCGGGTG AAATTCAACT GGGACCGTTA TAACCCGGCA
GACCAGGACA GCTCGTGCTG GATCCGTGTG GCACAGGCGT GGGCAGGCAC CGGTTTTGGC
AACCTGGCGA TACCGCGTGT GGGTCAGGAG GTGATAGTGG ACTTCCTCAA CGGCGATCCG
GACCAGCCGA TCATTATGGG GCGCACCTAC CACCAGGAAA ACCGCACCCC CGGCAGCCTG
CCGGGGACGA AGACGCAGAT GACCATCCGT TCCAAAACGT ATATGGGCAG CGGGTTTAAT
GAGCTGAAGT TTGATGATGC GACAGGGAGA GAACAGGTCT ACATCCACGC GCAGAAGAAC
ATGGATACCG AAGTGCTCAA CGACCGTACC ACCACCGTAA AACACGATCA TCGCGAAACC
GTAAAAAATG ACCAGACGGT CACGATCCAG GAAGGTAACC GCCTTCTTAC GGTGGAAAAA
GGCCACAAGA TCACCGGAGT ACTGAAAGGG TCTTTATCTG AGGATGTCTT TCAGGACAGA
GGCACGATTG CCGGTTCGGT GCATGTTGAC GCTGTAAACA ATGGTGGCGA AGGCAACGGT
ATACAGGCTT ATACGGCAAT TAAGGAAATT ATGCTGGCCG TGGAGGAAAG CAAAATTGCG
CTGACGCCGG ATGGCATTCA GCTACAGGTC GGGGAATCAA CGGTAATCAG GCTGTCGAAG
GATGGCATCA CCATCGTGGG CGGTTCTGTT TTCATCAACT GA
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| Protein sequence | MSTGLRFTLE VDGLPPDAFA VVSFHLTQSL SSLFSLDLSL VSQQFLSLEF AQVLDKMAYL
TIWQGDDVQR RVKGVVTWFE LGENDKNQML YSMKVHPPLW RAGLRQNFRI FQNEDIKSIL
GTILQENGVT EWSPLFSEPH PSREFCVQYG ETDYDFLCRM AAEEGIFFYE EHAYKSTDQS
LVLCDTVRHL PESFEIPWNP NTRTEVSTLC ISQFRYSAQI RPSSVVTKDY TFKRPGWAGR
FDQEGQHQDY QRTQYEVYDY PGRFKGAHGQ NFARWQMEGW RNNAETARGM SRSPEIWPGR
RIVLTGHPQA NLNREWQVVA SELHGEQPQA VPGRRGAGTA LENHFAVIPA DRTWRPQPRL
KPLVDGPQSA VVTGPEGEEI FCDEHGRVRV KFNWDRYNPA DQDSSCWIRV AQAWAGTGFG
NLAIPRVGQE VIVDFLNGDP DQPIIMGRTY HQENRTPGSL PGTKTQMTIR SKTYMGSGFN
ELKFDDATGR EQVYIHAQKN MDTEVLNDRT TTVKHDHRET VKNDQTVTIQ EGNRLLTVEK
GHKITGVLKG SLSEDVFQDR GTIAGSVHVD AVNNGGEGNG IQAYTAIKEI MLAVEESKIA
LTPDGIQLQV GESTVIRLSK DGITIVGGSV FIN
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