Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_0632 |
Symbol | |
ID | 6967406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 654702 |
End bp | 655394 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643384670 |
Product | chaperone protein FimC homolog |
Protein accession | YP_002269184 |
Protein GI | 209397289 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.29537 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 0.474427 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGACTA AAATAAAGTT ATTGATGCTC ATTATATTTT ATTTAATCAT TTCGGCCAGC GTCCATGCTG CCGGAGGGAT CGCATTAGGT GCCACGCGTA TTATTTATCC CGCTGATGCT AAACAGACTG CGGTATGGAT TAGAAATAGC CATACCAATG AGCGTTTTCT GGTCAATTCG TGGATTGAAA ACAGCAGCGG TGTAAAAGAA AAGTCATTCA TCATTACACC GCCACTATTT GTTAGTGAAC CCAAAAGCGA AAATACTTTG CGTATTATTT ACACCGGTCC ACCGCTGGCA GCAGATCGTG AGTCTCTGTT CTGGATGAAT GTTAAGACGA TTCCTTCGGT AGATAAAAAT GCATTGAACG GCAGGAATGT TTTGCAACTG GCGATTTTAT CGCGCATGAA GTTATTTCTC CGTCCAATTC AACTACAAGA ATTACCCGCA GAAGCGCCGG ATACACTCAA GTTTTCGCGA TCCGGTAACT ATATCAATGT TCATAATCCA TCACCTTTTT ATGTCACCCT GGTTAACTTA CAAGTGGGCA GCCAAAAGTT GGGGAATGCT ATGGCTGCAC CCAGAGTTAA TTCACAAATT CCCTTACCCT CAGGAGTGCA GGGAAAGCTG AAATTTCAGA CCGTTAATGA TTATGGTTCA GTAACCCCGG TCAGAGAAGT GAACTTAAAC TAA
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Protein sequence | MMTKIKLLML IIFYLIISAS VHAAGGIALG ATRIIYPADA KQTAVWIRNS HTNERFLVNS WIENSSGVKE KSFIITPPLF VSEPKSENTL RIIYTGPPLA ADRESLFWMN VKTIPSVDKN ALNGRNVLQL AILSRMKLFL RPIQLQELPA EAPDTLKFSR SGNYINVHNP SPFYVTLVNL QVGSQKLGNA MAAPRVNSQI PLPSGVQGKL KFQTVNDYGS VTPVREVNLN
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