Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_0600 |
Symbol | |
ID | 6970152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 617480 |
End bp | 619894 |
Gene Length | 2415 bp |
Protein Length | 804 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643384642 |
Product | efflux ABC transporter, permease protein |
Protein accession | YP_002269156 |
Protein GI | 209398271 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 0.77559 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGCAC GCTGGTTCTG GCGCGAATGG CGCTCGCCGT CGCTATTAAT TGTCTGGCTG GCGCTAAGCC TGGCGGTGGC CTGCGTGCTG GCGCTGGGCA ATATCAGCGA TCGCATGGAG AAGGGCTTAA GCCAACAAAG CCGGGAGTTT ATGGCGGGCG ATCGGGCGTT GCGCAGTTCG CGCGAAGTGC CGCAAGCGTG GCTGGAGGAA GCGCAAAAGC GCGGCCTGAA AGTCGGCAAG CAGCTGACTT TCGCCACCAT GACATTTGCA GGCGACACAC CGCAGCTGGC GAACGTTAAA GCGGTGGATG ATATCTACCC GATGTATGGC GATCTGCAAA CCAATCCCCC TGGCCTGAAA CCGCAGGCGG GCAGCGTATT GCTGGCCCCA CGCCTGATGG CACTGCTTAA CCTGAAAACG GGCGACACCA TTGACGTGGG CGATGCCACC TTGCGGATTG CCGGAGAAGT GATTCAGGAA CCGGATTCCG GTTTTAACCC CTTCCAGATG GCTCCGCGTC TGATGATGAA TCTGGCGGAT GTCGATAAAA CCGGAGCCGT GCAGCCGGGG AGTCGGGTCA CCTGGCGCTA TAAATTCGGC GGCAGCGAGA ACCAGCTCGA CAGCTATGAG AAATGGTTGT TACCTCAGCT TAAACCCGAA CAACGCTGGT ACGGTCTGGA ACAGGACGAA GGCGCGCTGG GGCGATCGAT GGAACGCTCG CAACAGTTCC TGCTGCTTTC GGCACTTCTG ACCTTGCTGC TGGCAGTGGC AGCAGTGGCG GTAGCGATGA ATCATTACTG TCGCAGTCGC TACGATCTGG TGGCGATCCT CAAAACGCTG GGGGCAGGGC GAGCGCAACT GCGTAAGCTA ATCGTCGGTC AGTGGTTGAT GGTGCTGACG CTTTCAGCCG TTACCGGTGG GGCGATAGGC CTGTTGTTCG AAAACGTGTT GATGGTGCTG CTCAAGCCCG TTCTGCCTGC TGCACTACCG CCAGCCAGCC TCTGGCCATG GCTATGGGCG CTGGGCACCA TGACGGTCAT CTCGCTGCTG GTGGGGCTAC GACCATACCG CTTGTTGCTG GCAACGCAGC CTTTACGCGT ATTACGTAAT TATGTGGTTG CGAACGTCTG GCCGCTGAAG TTTTATCTGC CGATTGTCAG TGTGGTGGTT GTGCTGCTGC TCGCCGGATT AATGGGTGGC AGCATGCTGC TTTGGGCGGT GCTGGCGGGC GCGGTAGTAC TGGCTTTGCT GTGCGGTGTA CTGGGCTGGA TGCTGCTGAA TGTACTTCGC CGCATGACGC TGAAATCGCT GCCTCTGCGC CTGGCGGTTA GCCGCCTGTT ACGTCAGCCG TGGTCAACGT TAAGCCAGCT TTCGGCATTT TCGCTCTCCT TTATGCTGCT GGCACTGCTA CTGGTGCTGC GTGGCGATCT GCTCGACCGC TGGCAGCAGC AGTTACCGCC AGAAAGCCCG AACTACTTTT TAATCAACAT CGCCACAGAA CAGGTTACGC CGCTAAAAGC GTTCCTCGCG GAACATCAGA TAGTCCCGGA ATCGTTTTAT CCGGTGGTGC GAGCGCGGCT GACGGCGATT AACGGCAAGC CGACAGAAGG CAATGAAGAT GAGGCGCTCA ACCGCGAACT CAATCTTACC TGGCAAAATA CGCGGCCCGA TCATAATCCG ATTGTCGCCG GTAACTGGCC GCCAAAAGCT GATGAAGTTT CGATGGAAGA GGGGCTGGCG AAACGCTTAA ACGTTACCCT CGGCGATACC GTGACTTTTA TGGGCGATAC CCAGGAGTTC CGCGCTAAAG TGACCAGCCT GCGCAAAGTG GACTGGGAAA GTCTGCGGCC TAATTTCTAT TTTATTTTCC CTGAAGGGGC ATTAGACGGG CAACCGCAGA GCTGGCTTAC CAGTTTCCGC TGGGAGAATG GCAACGGCAT GTTGACGCAA CTCAACCGCC AGTTCCCTAC CATTAGCCTG TTAGACATTG GCGCGATTTT AAAACAGGTC GGTCAGGTGC TGGAGCAGGT AAGTCGGGCG CTGGAGGTGA TGGTGGTGCT GGTCACCGCC TGCGGTATGT TGCTGTTGCT GGCACAGGTG CAGGTGGGAA TGCGTCAGCG TCATCAGGAG CTGGTGGTGT GGCGCACACT CGGTGCGGGG AAAAAACTGC TGCGTACCAC GTTGTGGTGT GAGTTCGCCA TGCTTGGGTT TGTTTCCGGC CTGGTGGCCG CAATTGGTGC GGAAACGGCA CTGGCAGTGT TGCAGGCGAA AGTGTTTGAT TTTCCGTGGG AGCCAGACTG GCGATTGTGG ATTGTTCTGC CGTGCAGCGG TGCGCTGCTG CTGTCGCTTT TCGGCGGCTG GCTGGGCGCG AGACTGGTTA AGGGTAAGGC GCTGTTCAGG CAGTTTGCGG GGTGA
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Protein sequence | MIARWFWREW RSPSLLIVWL ALSLAVACVL ALGNISDRME KGLSQQSREF MAGDRALRSS REVPQAWLEE AQKRGLKVGK QLTFATMTFA GDTPQLANVK AVDDIYPMYG DLQTNPPGLK PQAGSVLLAP RLMALLNLKT GDTIDVGDAT LRIAGEVIQE PDSGFNPFQM APRLMMNLAD VDKTGAVQPG SRVTWRYKFG GSENQLDSYE KWLLPQLKPE QRWYGLEQDE GALGRSMERS QQFLLLSALL TLLLAVAAVA VAMNHYCRSR YDLVAILKTL GAGRAQLRKL IVGQWLMVLT LSAVTGGAIG LLFENVLMVL LKPVLPAALP PASLWPWLWA LGTMTVISLL VGLRPYRLLL ATQPLRVLRN YVVANVWPLK FYLPIVSVVV VLLLAGLMGG SMLLWAVLAG AVVLALLCGV LGWMLLNVLR RMTLKSLPLR LAVSRLLRQP WSTLSQLSAF SLSFMLLALL LVLRGDLLDR WQQQLPPESP NYFLINIATE QVTPLKAFLA EHQIVPESFY PVVRARLTAI NGKPTEGNED EALNRELNLT WQNTRPDHNP IVAGNWPPKA DEVSMEEGLA KRLNVTLGDT VTFMGDTQEF RAKVTSLRKV DWESLRPNFY FIFPEGALDG QPQSWLTSFR WENGNGMLTQ LNRQFPTISL LDIGAILKQV GQVLEQVSRA LEVMVVLVTA CGMLLLLAQV QVGMRQRHQE LVVWRTLGAG KKLLRTTLWC EFAMLGFVSG LVAAIGAETA LAVLQAKVFD FPWEPDWRLW IVLPCSGALL LSLFGGWLGA RLVKGKALFR QFAG
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