Gene ECH74115_0600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_0600 
Symbol 
ID6970152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp617480 
End bp619894 
Gene Length2415 bp 
Protein Length804 aa 
Translation table11 
GC content58% 
IMG OID643384642 
Productefflux ABC transporter, permease protein 
Protein accessionYP_002269156 
Protein GI209398271 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.77559 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCAC GCTGGTTCTG GCGCGAATGG CGCTCGCCGT CGCTATTAAT TGTCTGGCTG 
GCGCTAAGCC TGGCGGTGGC CTGCGTGCTG GCGCTGGGCA ATATCAGCGA TCGCATGGAG
AAGGGCTTAA GCCAACAAAG CCGGGAGTTT ATGGCGGGCG ATCGGGCGTT GCGCAGTTCG
CGCGAAGTGC CGCAAGCGTG GCTGGAGGAA GCGCAAAAGC GCGGCCTGAA AGTCGGCAAG
CAGCTGACTT TCGCCACCAT GACATTTGCA GGCGACACAC CGCAGCTGGC GAACGTTAAA
GCGGTGGATG ATATCTACCC GATGTATGGC GATCTGCAAA CCAATCCCCC TGGCCTGAAA
CCGCAGGCGG GCAGCGTATT GCTGGCCCCA CGCCTGATGG CACTGCTTAA CCTGAAAACG
GGCGACACCA TTGACGTGGG CGATGCCACC TTGCGGATTG CCGGAGAAGT GATTCAGGAA
CCGGATTCCG GTTTTAACCC CTTCCAGATG GCTCCGCGTC TGATGATGAA TCTGGCGGAT
GTCGATAAAA CCGGAGCCGT GCAGCCGGGG AGTCGGGTCA CCTGGCGCTA TAAATTCGGC
GGCAGCGAGA ACCAGCTCGA CAGCTATGAG AAATGGTTGT TACCTCAGCT TAAACCCGAA
CAACGCTGGT ACGGTCTGGA ACAGGACGAA GGCGCGCTGG GGCGATCGAT GGAACGCTCG
CAACAGTTCC TGCTGCTTTC GGCACTTCTG ACCTTGCTGC TGGCAGTGGC AGCAGTGGCG
GTAGCGATGA ATCATTACTG TCGCAGTCGC TACGATCTGG TGGCGATCCT CAAAACGCTG
GGGGCAGGGC GAGCGCAACT GCGTAAGCTA ATCGTCGGTC AGTGGTTGAT GGTGCTGACG
CTTTCAGCCG TTACCGGTGG GGCGATAGGC CTGTTGTTCG AAAACGTGTT GATGGTGCTG
CTCAAGCCCG TTCTGCCTGC TGCACTACCG CCAGCCAGCC TCTGGCCATG GCTATGGGCG
CTGGGCACCA TGACGGTCAT CTCGCTGCTG GTGGGGCTAC GACCATACCG CTTGTTGCTG
GCAACGCAGC CTTTACGCGT ATTACGTAAT TATGTGGTTG CGAACGTCTG GCCGCTGAAG
TTTTATCTGC CGATTGTCAG TGTGGTGGTT GTGCTGCTGC TCGCCGGATT AATGGGTGGC
AGCATGCTGC TTTGGGCGGT GCTGGCGGGC GCGGTAGTAC TGGCTTTGCT GTGCGGTGTA
CTGGGCTGGA TGCTGCTGAA TGTACTTCGC CGCATGACGC TGAAATCGCT GCCTCTGCGC
CTGGCGGTTA GCCGCCTGTT ACGTCAGCCG TGGTCAACGT TAAGCCAGCT TTCGGCATTT
TCGCTCTCCT TTATGCTGCT GGCACTGCTA CTGGTGCTGC GTGGCGATCT GCTCGACCGC
TGGCAGCAGC AGTTACCGCC AGAAAGCCCG AACTACTTTT TAATCAACAT CGCCACAGAA
CAGGTTACGC CGCTAAAAGC GTTCCTCGCG GAACATCAGA TAGTCCCGGA ATCGTTTTAT
CCGGTGGTGC GAGCGCGGCT GACGGCGATT AACGGCAAGC CGACAGAAGG CAATGAAGAT
GAGGCGCTCA ACCGCGAACT CAATCTTACC TGGCAAAATA CGCGGCCCGA TCATAATCCG
ATTGTCGCCG GTAACTGGCC GCCAAAAGCT GATGAAGTTT CGATGGAAGA GGGGCTGGCG
AAACGCTTAA ACGTTACCCT CGGCGATACC GTGACTTTTA TGGGCGATAC CCAGGAGTTC
CGCGCTAAAG TGACCAGCCT GCGCAAAGTG GACTGGGAAA GTCTGCGGCC TAATTTCTAT
TTTATTTTCC CTGAAGGGGC ATTAGACGGG CAACCGCAGA GCTGGCTTAC CAGTTTCCGC
TGGGAGAATG GCAACGGCAT GTTGACGCAA CTCAACCGCC AGTTCCCTAC CATTAGCCTG
TTAGACATTG GCGCGATTTT AAAACAGGTC GGTCAGGTGC TGGAGCAGGT AAGTCGGGCG
CTGGAGGTGA TGGTGGTGCT GGTCACCGCC TGCGGTATGT TGCTGTTGCT GGCACAGGTG
CAGGTGGGAA TGCGTCAGCG TCATCAGGAG CTGGTGGTGT GGCGCACACT CGGTGCGGGG
AAAAAACTGC TGCGTACCAC GTTGTGGTGT GAGTTCGCCA TGCTTGGGTT TGTTTCCGGC
CTGGTGGCCG CAATTGGTGC GGAAACGGCA CTGGCAGTGT TGCAGGCGAA AGTGTTTGAT
TTTCCGTGGG AGCCAGACTG GCGATTGTGG ATTGTTCTGC CGTGCAGCGG TGCGCTGCTG
CTGTCGCTTT TCGGCGGCTG GCTGGGCGCG AGACTGGTTA AGGGTAAGGC GCTGTTCAGG
CAGTTTGCGG GGTGA
 
Protein sequence
MIARWFWREW RSPSLLIVWL ALSLAVACVL ALGNISDRME KGLSQQSREF MAGDRALRSS 
REVPQAWLEE AQKRGLKVGK QLTFATMTFA GDTPQLANVK AVDDIYPMYG DLQTNPPGLK
PQAGSVLLAP RLMALLNLKT GDTIDVGDAT LRIAGEVIQE PDSGFNPFQM APRLMMNLAD
VDKTGAVQPG SRVTWRYKFG GSENQLDSYE KWLLPQLKPE QRWYGLEQDE GALGRSMERS
QQFLLLSALL TLLLAVAAVA VAMNHYCRSR YDLVAILKTL GAGRAQLRKL IVGQWLMVLT
LSAVTGGAIG LLFENVLMVL LKPVLPAALP PASLWPWLWA LGTMTVISLL VGLRPYRLLL
ATQPLRVLRN YVVANVWPLK FYLPIVSVVV VLLLAGLMGG SMLLWAVLAG AVVLALLCGV
LGWMLLNVLR RMTLKSLPLR LAVSRLLRQP WSTLSQLSAF SLSFMLLALL LVLRGDLLDR
WQQQLPPESP NYFLINIATE QVTPLKAFLA EHQIVPESFY PVVRARLTAI NGKPTEGNED
EALNRELNLT WQNTRPDHNP IVAGNWPPKA DEVSMEEGLA KRLNVTLGDT VTFMGDTQEF
RAKVTSLRKV DWESLRPNFY FIFPEGALDG QPQSWLTSFR WENGNGMLTQ LNRQFPTISL
LDIGAILKQV GQVLEQVSRA LEVMVVLVTA CGMLLLLAQV QVGMRQRHQE LVVWRTLGAG
KKLLRTTLWC EFAMLGFVSG LVAAIGAETA LAVLQAKVFD FPWEPDWRLW IVLPCSGALL
LSLFGGWLGA RLVKGKALFR QFAG