Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_0597 |
Symbol | |
ID | 6971622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 615404 |
End bp | 616213 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643384639 |
Product | short chain dehydrogenase |
Protein accession | YP_002269153 |
Protein GI | 209398805 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 0.853747 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCATA AAGCAACGGA GATCCTGACA GGTAAAGTTA TGCAAAAATC GGTCTTAATT ACCGGATGTT CCAGTGGAAT TGGCCTGGAA AGCGCGCTCG AATTAAAACG CCAGGGTTTT CATGTGCTGG CAGGTTGCCG GAAACCGGAT GATGTTGAGC GCATGAACAG CATGGGATTT ACCGGCGTGT TGATCGATCT GGATTCACCA GAAAGTGTTG ATCGCGCAGC CGACGAGGTG ATCGCCCTGA CCGATAATTG TCTGTATGGG ATCTTTAACA ATGCCGGATT CGGCATGTAT GGCCCCCTTT CCACCATCAG CCGTGCGCAG ATGGAACAGC AGTTTTCCGC CAACTTTTTC GGCGCACACC AGCTCACCAT GCGCCTGTTA CCCGCGATGT TGCCGCACGG TGAAGGGCGT ATTGTGATGA CCTCATCGGT GATGGGATTA ATCTCCACAC CGGGTCGTGG CGCTTACGCG GCCAGTAAAT ATGCGCTGGA GGCGTGGTCA GACGCGCTGC GCATGGAGCT GCGCCGCAGC GGAATTAAAG TCAGCCTGAT CGAACCCGGT CCCATTCGTA CTCGCTTCAC CGACAACGTC AACCAGACGC AAAGTGATAA ACCAGTCGAA AATCCCGGCA TCGCCGCCCG CTTTACGTTG GGACCGGAAG CGGTGGTGGA CAAAGTACGC CATGCTTTTA TTAGCGAGAA GCCGAAGATG CGCTATCCGG TAACGCTGGT GACCTGGGCG GTAATGGTGC TTAAGCGCCT GCTGCCGGGG CGCGTGATGG ACAAAATATT GCAGGGGTGA
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Protein sequence | MTHKATEILT GKVMQKSVLI TGCSSGIGLE SALELKRQGF HVLAGCRKPD DVERMNSMGF TGVLIDLDSP ESVDRAADEV IALTDNCLYG IFNNAGFGMY GPLSTISRAQ MEQQFSANFF GAHQLTMRLL PAMLPHGEGR IVMTSSVMGL ISTPGRGAYA ASKYALEAWS DALRMELRRS GIKVSLIEPG PIRTRFTDNV NQTQSDKPVE NPGIAARFTL GPEAVVDKVR HAFISEKPKM RYPVTLVTWA VMVLKRLLPG RVMDKILQG
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