| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0496 |
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| Symbol | ribD |
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| ID | 6967169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 501296 |
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| End bp | 502399 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643384544 |
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| Product | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase |
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| Protein accession | YP_002269058 |
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| Protein GI | 209395713 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGGACG AGTATTACAT GGCGCGGGCG CTAAAGCTGG CGCAACGAGG ACGTTTTACC
ACCCACCCCA ACCCGAATGT CGGGTGCGTC ATTGTCAAAG ATGGCGAAAT TGTCGGTGAA
GGTTACCACC AACGAGCGGG TGAACCACAT GCCGAAGTAC ACGCGTTGCG TATGGCGGGT
GAAAAAGCCA AAGGTGCGAC CGCCTATGTC ACACTCGAAC CCTGTAGCCA TCATGGTCGT
ACGCCACCGT GCTGTGACGC ACTCATCGCC GCTGGCGTAG CGCGCGTGGT CGCTGCGATG
CAGGACCCGA ACCCGCAGGT CGCTGGGCGT GGACTTTACC GTCTGCAACA GGCTGGCATT
GACGTCAGCC ACGGCCTGAT GATGAGTGAA GCCGAGCAAT TGAATAAAGG CTTTCTCAAG
CGGATGCGCA CCGGCTTTCC TTATATTCAG TTAAAACTTG GCGCATCGCT TGATGGCCGC
ACGGCGATGG CGAGCGGCGA AAGCCAGTGG ATCACTTCGC CTCAGGCGCG GCGCGACGTA
CAACGACTGC GCGCACAAAG TCATGCCATT TTAACCAGCA GCGCTACGGT GCTGGCGGAT
GATCCTGCCT TAACGGTGCG TTGGTCTGAA CTGGATGTAC AAACTCAGGC GCTCTACCCG
CAACATCATC TCCGCCAGCC GGTACGTATT GTGATTGATA GCCAAAATCG CGTGACGCCG
GAACATCACA TTGTGCAGCA GCCCGGCGAA ACCTGGTTCG CGCGTACGCA GGAAGATTCT
CGTGAGTGGC CGGAAACGGT GCGTACCTTG CTGATTCCAG AGCATAAAGG TCATCTGGAT
CTGGTTGTAC TGATGATGCA ACTGGGTAAA CAGCAGATTA ACAGCATCTG GGTGGAAGCG
GGGCCAACGC TCGCTGGCGC ATTGCTGCAG GCGGGGTTAG TCGATGAGCT GATTGTCTAT
ATCGCACCTA AACTATTAGG CAGCGACGCC CGTGGATTAT GCACACTGCC AGGGCTTGAG
AAATTAGCTG ACGCCCCCCA ATTTAAATTC AAAGAGATAC GTCATGTAGG CCCGGATGTT
TGCCTGCATT TAGTGGGTGC ATGA
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| Protein sequence | MQDEYYMARA LKLAQRGRFT THPNPNVGCV IVKDGEIVGE GYHQRAGEPH AEVHALRMAG
EKAKGATAYV TLEPCSHHGR TPPCCDALIA AGVARVVAAM QDPNPQVAGR GLYRLQQAGI
DVSHGLMMSE AEQLNKGFLK RMRTGFPYIQ LKLGASLDGR TAMASGESQW ITSPQARRDV
QRLRAQSHAI LTSSATVLAD DPALTVRWSE LDVQTQALYP QHHLRQPVRI VIDSQNRVTP
EHHIVQQPGE TWFARTQEDS REWPETVRTL LIPEHKGHLD LVVLMMQLGK QQINSIWVEA
GPTLAGALLQ AGLVDELIVY IAPKLLGSDA RGLCTLPGLE KLADAPQFKF KEIRHVGPDV
CLHLVGA
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