| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0411 |
|---|
| Symbol | cynR |
|---|
| ID | 6970567 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 418165 |
|---|
| End bp | 419064 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643384463 |
|---|
| Product | DNA-binding transcriptional regulator CynR |
|---|
| Protein accession | YP_002268977 |
|---|
| Protein GI | 209398898 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 70 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTCTC GACATATCAA TTATTTTCTT GCCGTGGCTG AACATGGCAG CTTCACCCGT
GCCGCCAGTG CGTTGCACGT CTCTCAGCCT GCGCTTTCCC AGCAGATTCG CCAGTTAGAG
GAGAGTTTAG GCGTGCCGCT GTTTGACCGT AGCGGGCGAA CGATTCATCT CACTGATGCA
GGAGAAGTCT GGCGACAGTA CGCCAGCCGG GCGTTACAGG AACTGGGAGC GGGTAAACGG
GCGATTCATG ATGTTGCCGA TCTGACGAGA GGATCGCTGC GTATCGCCGT CACCCCCACC
TTTACGAGCT ACTTTATCGG CCCCTTAATG GCGGATTTCT ATGCGCGCTA CCCCGGCATC
ACGCTCCAGC TACAGGAAAT GTCGCAGGAG AAAATCGAAG ATCTGCTTTG TCGCGACGAG
CTGGACGTTG GGATTGCCTT CGCGCCTGTG CATTTGCCGG AGCTGGAGGC AATTCCTTTA
CTGACAGAAA GTTTAGCGTT AGTCGTGGCG CAACATCATC CGCTGGCTGC CTGTGAACAG
GTGGCGTTGA GTCGCTTGCA TGATGAAAAA CTGGTCCTGC TCAGCGCGGA ATTTGCCACC
AGAGAGCAGA TTGACCACTA CTGCGAGAAA GCGGGGCTGC ATCCACAGGT GGTCATTGAG
GCGAACTCAA TTAGCGCGGT TCTGGAGCTG ATTCGCCGCA CTTCCCTTTC CACATTGTTA
CCAGCAGCGA TTGCCACACA ACATGACGGG CTTAAAGCGA TTCCTCTTGC CCCGCCACTA
CTGGAGAGAA CGGCGGTTTT GTTGCGGCGG AAAAATAGCT GGCAGACAGC CGCCGCGAAG
GCATTTTTGC ACATGGCGTT GGAGGAATGT GCGGATGTTG GCGAGAATGA ATCGCGGTAA
|
|---|
| Protein sequence | MLSRHINYFL AVAEHGSFTR AASALHVSQP ALSQQIRQLE ESLGVPLFDR SGRTIHLTDA
GEVWRQYASR ALQELGAGKR AIHDVADLTR GSLRIAVTPT FTSYFIGPLM ADFYARYPGI
TLQLQEMSQE KIEDLLCRDE LDVGIAFAPV HLPELEAIPL LTESLALVVA QHHPLAACEQ
VALSRLHDEK LVLLSAEFAT REQIDHYCEK AGLHPQVVIE ANSISAVLEL IRRTSLSTLL
PAAIATQHDG LKAIPLAPPL LERTAVLLRR KNSWQTAAAK AFLHMALEEC ADVGENESR
|
|---|
| |