| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0410 |
|---|
| Symbol | codA |
|---|
| ID | 6967287 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 416749 |
|---|
| End bp | 418032 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643384462 |
|---|
| Product | cytosine deaminase |
|---|
| Protein accession | YP_002268976 |
|---|
| Protein GI | 209399439 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 67 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCGAATA ACGCTTTACA AACAATTATT AACGCCCGGT TGCCAGGCAA AGAGGGGCTG
TGGCAGATTC ATCTGCAGGA CGGAAAAATC AGCGCCATTG ATGCGCAATC CGGCGTGATG
CCCATAACTG AAAACAGCCT GGATGCCGAA CAAGGTTTAG TTATACCGCC GTTTGTGGAG
CCACATATTC ACCTGGACAC CACGCAAACC GCCGGACAAC CGAACTGGAA TCAGTCCGGC
ACGCTGTTTG AAGGCATTGA ACGCTGGGCC GAGCGCAAAG CGTTATTAAC CCATGACGAT
GTGAAACAAC GCGCATGGCA AACGCTGAAA TGGCAGATTG CCAACGGCAT TCAGCATGTG
CGTACCCATG TCGATGTTTC GGATGCAACG CTAACTGCGC TGAAAGCAAT GCTGGAAGTG
AAGCTGGAAG TCGCGCCGTG GATTGATCTG CAAATCGTCG CCTTCCCTCA GGAAGGGATT
TTGTCGTATC CCAACGGTGA AGCGTTGCTG GAAGAGGCGT TACGCTTAGG GGCAGATGTA
GTGGGGGCGA TTCCGCATTT TGAATTTACC CGTGAATACG GCGTGGAGTC GCTGCATAAA
ACCTTCGCCC TGGCGCAAAA ATACGACCGT CTCATCGACG TTCACTGTGA TGAGATCGAT
GACGAGCAGT CGCGCTTTGT CGAAACCGTT GCTGCCCTGG CGCACCGTGA AGGCATGGGC
GCGCGAGTCA CCGCCAGCCA CACCACGGCA ATGCACTCTT ATAACGGGGC GTATACCTCA
CGTCTGTTCC GCTTGCTGAA AATGTCCGGT ATTAACTTTG TCGCCAACCC GCTGGTCAAT
ATTCATCTGC AAGGACGATT CGATACGTAT CCAAAACGTC GCGGCATCAC GCGCGTTAAA
GAGATGCTGG AGTCCGGCAT TAACGTCTGC TTTGGTCACG ATGATGTCTT CGATCCGTGG
TATCCGCTGG GAACGGCGAA TATGCTGCAA GTGCTGCATA TGGGGCTGCA TGTTTGCCAG
CTGATGGGCT ATGGGCAGAT TAACGATGGC CTGAATTTAA TCACCCACCA CAGCGCCAGG
ACGTTGAATT TGCAGGATTA CAGCATTGCC GCCGGAAACA GCGCCAACCT GATTATCCTG
CCGGCTGAAA ATGGATTTGA TGCGCTGCGC CGTCAGGTTC CGGTACGTTA TTCGGTACGT
GGCGGCAAGG TGATTGCCAG CACACAACCG GCACAAACCA CCGTATATCT GGAGCAGCCG
GAAGCCATCG ATTACAAACG GTGA
|
|---|
| Protein sequence | MSNNALQTII NARLPGKEGL WQIHLQDGKI SAIDAQSGVM PITENSLDAE QGLVIPPFVE
PHIHLDTTQT AGQPNWNQSG TLFEGIERWA ERKALLTHDD VKQRAWQTLK WQIANGIQHV
RTHVDVSDAT LTALKAMLEV KLEVAPWIDL QIVAFPQEGI LSYPNGEALL EEALRLGADV
VGAIPHFEFT REYGVESLHK TFALAQKYDR LIDVHCDEID DEQSRFVETV AALAHREGMG
ARVTASHTTA MHSYNGAYTS RLFRLLKMSG INFVANPLVN IHLQGRFDTY PKRRGITRVK
EMLESGINVC FGHDDVFDPW YPLGTANMLQ VLHMGLHVCQ LMGYGQINDG LNLITHHSAR
TLNLQDYSIA AGNSANLIIL PAENGFDALR RQVPVRYSVR GGKVIASTQP AQTTVYLEQP
EAIDYKR
|
|---|
| |