| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0409 |
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| Symbol | codB |
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| ID | 6968513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 415500 |
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| End bp | 416759 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643384461 |
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| Product | cytosine permease |
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| Protein accession | YP_002268975 |
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| Protein GI | 209396382 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1457] Purine-cytosine permease and related proteins |
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| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGCAAG ATAACAACTT TAGCCAGGGG CCGGTCCCGC AGTCGGCGCG GAAAGGGGTA
TTGGCATTGA CGTTCGTCAT GCTGGGATTA ACCTTCTTTT CCGCCAGTAT GTGGACCGGC
GGCACTCTCG GAACCGGTCT TAGCTATCAT GATTTCTTCC TCGCAGTTCT CATCGGTAAT
CTTCTCCTCG GTATTTACAC TTCATTTCTC GGTTACATTG GCGCAAAAAC CGGCCTGACC
ACTCATCTTC TTGCTCGCTT CTCGTTTGGT GTTAAAGGCT CATGGCTGCC TTCACTGCTG
CTGGGCGGCA CCCAGGTTGG CTGGTTTGGC GTCGGTGTGG CGATGTTTGC TATTCCGGTG
GGCAAGGCAA CCGGGCTGGA TATTAATTTG CTGATTGCCG TTTCCGGTTT ACTGATGACC
GTCACCGTCT TCTTTGGCAT TTCGGCGCTG ACGGTTCTTT CGTTGATTGC GGTTCCGGCT
ATCGCCTGTC TTGGCGGTTA TTCCGTGTGG CTGGCCGTTA ACGGCATGGG CGGCCTGGAC
GCCTTAAAAG CGGTCGTTCC CGCACAACCG TTAGATTTCA ATGTCGCGCT GGCGCTGGTT
GTGGGGTCAT TTATCAGTGC GGGCACGCTC ACCGCTGACT TTGTCCGCTT TGGTCGCAAT
GCCAAACTGG CGGTGCTGGT GGCGATGGTG GCCTTTTTCC TCGGCAACTC GTTGATGTTT
ATTTTCGGTG CAGCGGGCGC TGCGGCACTG GGGATGGCGG ATATCTCTGA TGTGATGATT
GCTCAGGGCC TGCTGTTGCC TGCGATTGTG GTGCTGGGGC TAAATATCTG GACCACCAAC
GATAACGCGC TCTATGCGTC GGGTTTAGGT TTCGCCAACA TTACCGGGAT GTCGAGCAAA
ACCCTTTCGG TAATCAACGG TATTATCGGT ACGGTCTGTG CATTATGGCT GTATAACAAT
TTTGTCGGCT GGTTGACCTT CCTTTCGGCA GCTATTCCTC CAGTGGGTGG CGTGATCATT
GCCGACTATC TGATGAACCG TCGCCGCTAT GAGCACTTTG CGACCACGCG TATGATGAGT
GTCAATTGGG TGGCGATTCT GGCGGTCGCC CTGGGGATTG CTGCAGGCCA CTGGTTACCG
GGAATTGTTC CGGTCAACGC GGTATTAGGT GGCGCGCTGA GCTATCTGAT CCTTAACCCG
ATTTTGAATC GTAAAACGAC AGCAGCAATG ACGCATGTGG AGGCTAACAG TGTCGAATAA
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| Protein sequence | MSQDNNFSQG PVPQSARKGV LALTFVMLGL TFFSASMWTG GTLGTGLSYH DFFLAVLIGN
LLLGIYTSFL GYIGAKTGLT THLLARFSFG VKGSWLPSLL LGGTQVGWFG VGVAMFAIPV
GKATGLDINL LIAVSGLLMT VTVFFGISAL TVLSLIAVPA IACLGGYSVW LAVNGMGGLD
ALKAVVPAQP LDFNVALALV VGSFISAGTL TADFVRFGRN AKLAVLVAMV AFFLGNSLMF
IFGAAGAAAL GMADISDVMI AQGLLLPAIV VLGLNIWTTN DNALYASGLG FANITGMSSK
TLSVINGIIG TVCALWLYNN FVGWLTFLSA AIPPVGGVII ADYLMNRRRY EHFATTRMMS
VNWVAILAVA LGIAAGHWLP GIVPVNAVLG GALSYLILNP ILNRKTTAAM THVEANSVE
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