| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0405 |
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| Symbol | prpD |
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| ID | 6966826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 411510 |
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| End bp | 412961 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643384457 |
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| Product | 2-methylcitrate dehydratase |
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| Protein accession | YP_002268971 |
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| Protein GI | 209398521 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2079] Uncharacterized protein involved in propionate catabolism |
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| TIGRFAM ID | [TIGR02330] 2-methylcitrate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCTC AAATCAACAA CATCCGCCCG GAATTTGATC GTGAAATCGT TGATATCGTC
GATTACGTCA TGAACTACGA AATCAGCTCC AAAGTAGCCT ACGACACCGC ACATTACTGT
CTGCTCGACA CGCTCGGCTG CGGTCTTGAA GCTCTCGAAT ACCCAGCCTG TAAAAAACTG
CTGGGGCCAA TTGTCCCCGG CACCGTCGTA CCTAACGGCG TGCGCGTCCC CGGAACTCAG
TTCCAGCTCG ACCCCGTCCA GGCGGCATTT AACATCGGCG CGATGATCCG CTGGCTCGAT
TTCAACGATA CCTGGCTTGC GGCAGAGTGG GGCCATCCTT CCGACAATCT CGGCGGCATT
CTGGCAACGG CGGACTGGCT TTCACGCAAC GCGGTCGCCA GCGGCAAAGC GCCGTTGACC
ATGAAACAGG TGCTGACCGG AATGATTAAA GCCCATGAAA TTCAGGGCTG CATCGCGCTG
GAAAACTCCT TTAACCGCGT CGGCCTCGAC CACGTTCTGT TAGTGAAAGT GGCTTCCACC
GCCGTGGTCG CCGAAATGCT TGGCCTGACC CGCGAGGAAA TTCTCAACGC TGTTTCGCTG
GCGTGGGTGG ACGGTCAGTC GCTGCGCACC TATCGCCATG CGCCGAACAC CGGCACGCGT
AAATCCTGGG CGGCGGGCGA TGCCACTTCC CGCGCGGTAC GTCTGGCACT GATGGCGAAA
ACGGGCGAAA TGGGTTACCC GTCAGCCCTG ACTGCGCCTG TGTGGGGCTT CTACGACGTC
TCCTTTAAAG GTGAATCGTT CCGCTTCCAG CGTCCGTACG GTTCTTACGT GATGGAAAAT
GTGCTGTTCA AAATCTCCTT CCCGGCGGAG TTCCACTCCC AGACGGCAGT TGAAGCAGCG
ATGACGCTCT ATGAACAGAT GCAGGCAGCA GGCAAAACGG CGGCAGATAT CGAAAAAGTG
TCCATCCGCA CCCACGAAGC CTGTATTCGC ATCATCGACA AAAAGGGGCC GCTCAATAAC
CCGGCAGACC GCGACCACTG CATTCAGTAC ATGGTGGCGA TCCCACTGCT ATTCGGGCGC
TTAACGGCGG CAGATTACGA GGACAACGTT GCGCAAGATA AACGCATTGA CGCCCTGCGC
GAGAAGATCA ATTGCTTTGA AGATCCGGTA TTTACCGCTG ACTACCACGA CCCGGAAAAA
CGCGCCATCG CCAATGCCAT TACCCTTGAG TTCACCGACG GCACACGATT TGAAGAAGTG
GTGGTGGAGT ACCCCATTGG TCATGCTCGC CGCCGTCAGG ATGGTATTCC GAAACTGGTC
GATAAATTCA AAATCAATCT CGCGCGCCAG TTCCCGACTC GCCAACAGCA GCGCATTCTG
GAGGTTTCTC TCGACAGAGC TCGCCTGGAA CAGATGCCGG TCAATGAGTA TCTCGACCTG
TACGTCATTT AA
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| Protein sequence | MSAQINNIRP EFDREIVDIV DYVMNYEISS KVAYDTAHYC LLDTLGCGLE ALEYPACKKL
LGPIVPGTVV PNGVRVPGTQ FQLDPVQAAF NIGAMIRWLD FNDTWLAAEW GHPSDNLGGI
LATADWLSRN AVASGKAPLT MKQVLTGMIK AHEIQGCIAL ENSFNRVGLD HVLLVKVAST
AVVAEMLGLT REEILNAVSL AWVDGQSLRT YRHAPNTGTR KSWAAGDATS RAVRLALMAK
TGEMGYPSAL TAPVWGFYDV SFKGESFRFQ RPYGSYVMEN VLFKISFPAE FHSQTAVEAA
MTLYEQMQAA GKTAADIEKV SIRTHEACIR IIDKKGPLNN PADRDHCIQY MVAIPLLFGR
LTAADYEDNV AQDKRIDALR EKINCFEDPV FTADYHDPEK RAIANAITLE FTDGTRFEEV
VVEYPIGHAR RRQDGIPKLV DKFKINLARQ FPTRQQQRIL EVSLDRARLE QMPVNEYLDL
YVI
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