| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0404 |
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| Symbol | prpC |
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| ID | 6971924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 410307 |
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| End bp | 411476 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643384456 |
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| Product | methylcitrate synthase |
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| Protein accession | YP_002268970 |
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| Protein GI | 209395959 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0372] Citrate synthase |
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| TIGRFAM ID | [TIGR01800] 2-methylcitrate synthase/citrate synthase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA CAACGATCCT GCAAAACAGT ACCCATGTCA TTAAACCGAA AAAATCTGTG
GCGCTTTCTG GCGTTCCGGC GGGCAATACG GCGCTCTGCA CCGTGGGTAA AAGTGGCAAT
GACTTGCATT ACCGTGGCTA CGATATTCTT GATCTGGCGG AACATTGCGA ATTTGAAGAA
GTGGCGCATC TGCTGATCCA CGGCAAACTG CCGACCCGTG ACGAACTCGC CGCCTACAAA
ACGAAACTGA AAGCCCTGCG CGGTTTACCG GCTAACGTGC GTACCGTGCT GGAAGCCTTA
CCGGCGGCGT CACACCCGAT GGATGTTATG CGCACCGGCG TTTCCGCGCT CGGCTGCACG
CTGCCAGAAA AAGAGGGGCA TACCGTCTCT GGCGCGCGGG ATATTGCCGA CAAACTGCTG
GCGTCACTTA GCTCGATTCT TCTCTACTGG TATCACTACA GCCACAACGG CGAACGCATC
CAGCCGGAAA CCGATGACGA CTCCATCGGT GGTCACTTCC TGCATCTGCT GCACGGCGAA
AAGCCGTCGC AAAGCTGGGA AAAGGCGATG CATATTTCGC TGGTGCTGTA CGCCGAACAC
GAGTTTAACG CCTCCACCTT TACCAGCCGG GTGATTGCGG GCACTGGCTC TGATATGTAT
TCCGCGATTA TTGGCGCGAT TGGTGCACTG CGCGGGCCGA AGCACGGCGG GGCGAATGAA
GTGTCGCTGG AGATCCAGCA ACGCTACGAA ACGCCGGACG AAGCCGAAGC CGATATCCGC
AAGCGGGTGG AAAGCAAAGA AGTGGTCATT GGTTTTGGTC ATCCGGTTTA TACCATCGCC
GACCCGCGCC ACCAGGTGAT TAAACGTGTG GCGAAGCAGC TCTCGCAGGA AGGCGGCTCG
CTGAAGATGT ACAACATCGC CGATCGCCTG GAAACGGTGA TGTGGGAGAG CAAAAAGATG
TTCCCCAATC TCGACTGGTT CTCCGCTGTT TCCTACAACA TGATGGGCGT TCCCACCGAG
ATGTTCACAC CACTGTTTGT TATCGCCCGC GTCACCGGCT GGGCGGCGCA CATTATCGAA
CAACGTCAGG ACAACAAAAT TATCCGTCCT TCCGCCAATT ATGTTGGACC GGAAGACCGC
CAGTTTGTCG CGCTGGATAA GCGCCAGTAA
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| Protein sequence | MSDTTILQNS THVIKPKKSV ALSGVPAGNT ALCTVGKSGN DLHYRGYDIL DLAEHCEFEE
VAHLLIHGKL PTRDELAAYK TKLKALRGLP ANVRTVLEAL PAASHPMDVM RTGVSALGCT
LPEKEGHTVS GARDIADKLL ASLSSILLYW YHYSHNGERI QPETDDDSIG GHFLHLLHGE
KPSQSWEKAM HISLVLYAEH EFNASTFTSR VIAGTGSDMY SAIIGAIGAL RGPKHGGANE
VSLEIQQRYE TPDEAEADIR KRVESKEVVI GFGHPVYTIA DPRHQVIKRV AKQLSQEGGS
LKMYNIADRL ETVMWESKKM FPNLDWFSAV SYNMMGVPTE MFTPLFVIAR VTGWAAHIIE
QRQDNKIIRP SANYVGPEDR QFVALDKRQ
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