Gene ECH74115_0403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_0403 
SymbolprpB 
ID6968194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp409261 
End bp410151 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content56% 
IMG OID643384455 
Product2-methylisocitrate lyase 
Protein accessionYP_002268969 
Protein GI209400701 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2513] PEP phosphonomutase and related enzymes 
TIGRFAM ID[TIGR02317] methylisocitrate lyase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTAC ACTCTCCAGG TAAAGCGTTT CGCGCTGCAC TGACTAAAGA AAATCCATTG 
CAGATTGTTG GCACCATTAA CGCCAACCAT GCGCTGTTGG CGCAGCGTGC CGGATATCAG
GCAATTTATC TCTCCGGCGG TGGCGTGGCG GCAGGGTCGC TGGGGCTGCC CGATCTCGGT
ATTTCTACTC TTGATGACGT GTTGACAGAT ATTCGCCGTA TCACCGACGT TTGTTCGCTG
CCGCTGCTGG TGGATGCGGA TATCGGTTTT GGTTCTTCTG CTTTTAACGT TGCGCGTACG
GTGAAATCGA TGATTAAAGC CGGTGCGGCG GGATTGCATA TTGAAGATCA GGTTGGTGCA
AAACGCTGTG GTCATCGCCC GAACAAAGCG ATCGTCTCGA AAGAGGAGAT GGTGGATCGG
ATCCGCGCGG CGGTGGATGC GAAAACCGAT CCTGATTTTG TGATCATGGC GCGCACCGAT
GCGCTGGCGG TAGAGGGGCT GGATGCGGCG ATCGAGCGTG CGCAGGCCTA TGTTGAAGCG
GGTGCCGAGA TGTTGTTCCC GGAGGCGATT ACCGAACTCG CCATGTACCG CCAGTTTGCC
GATGCGGTGC AGGTGCCAAT CCTCGCCAAC ATTACCGAAT TTGGCGCCAC GCCGCTGTTT
ACCACCGACG AATTACGCAG CGCTCATGTC GCGATGGCGC TGTACCCGCT TTCAGCGTTT
CGCGCCATGA ACCGCGCCGC CGAACATGTC TACAACGTCC TGCGCCAGGA AGGCACGCAG
AAAAGCGTCA TCGACACCAT GCAGACCCGC AACGAGCTGT ACGAAAGCAT CAACTACTAC
CACTACGAAG AGAAGCTCGA CGACCTGTTT GTCCGTAGCC AGGCGAAATA A
 
Protein sequence
MSLHSPGKAF RAALTKENPL QIVGTINANH ALLAQRAGYQ AIYLSGGGVA AGSLGLPDLG 
ISTLDDVLTD IRRITDVCSL PLLVDADIGF GSSAFNVART VKSMIKAGAA GLHIEDQVGA
KRCGHRPNKA IVSKEEMVDR IRAAVDAKTD PDFVIMARTD ALAVEGLDAA IERAQAYVEA
GAEMLFPEAI TELAMYRQFA DAVQVPILAN ITEFGATPLF TTDELRSAHV AMALYPLSAF
RAMNRAAEHV YNVLRQEGTQ KSVIDTMQTR NELYESINYY HYEEKLDDLF VRSQAK