| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0401 |
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| Symbol | prpR |
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| ID | 6971246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 407436 |
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| End bp | 409022 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643384454 |
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| Product | propionate catabolism operon regulatory protein PrpR |
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| Protein accession | YP_002268968 |
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| Protein GI | 209397236 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR02329] propionate catabolism operon regulatory protein PrpR |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACATC CACCACGGCT GAATGACGAC AAACCGGTTA TCTGGACGGT ATCTGTAACG
CGCTTATTCG AGCTGTTTCG CGATATCAGC CTCGAGTTTG ATCACCTGGC GAACATTACC
CCTATTCAGC TTGGCTTTGA AAAAGCAGTG ACCTACATCC GCAAGAAACT GGCAAACGAA
CGCTGTGACG CCATCATCGC CGCTGGCTCT AACGGCGCGT ACCTGAAAAG CCGCCTGTCA
GTGCCAGTTA TTTTGATTAA ACCGAGCGGC TACGATGTGT TACAGGCACT GGCAAAAGCC
GGAAAACTCA CCTCTTCTAT CGGCGTTGTC ACTTATCAGG AAACTATTCC GGCACTGGTG
GCGTTTCAAA AAACCTTTAA TTTGCGCCTC GATCAACGTA GCTACATTAC CGAAGAAGAC
GCACGCGGGC AGATTAACGA GCTAAAAGCT AACGGCACCG AAGCGGTGGT CGGCGCGGGG
CTGATTACCG ATCTGGCAGA AGAAGCCGGA ATGACCGGAA TTTTTATCTA TTCCGCCGCC
ACCGTGCGCC AGGCGTTCAG CGATGCGCTG GATATGACGC GCATGTCGTT ACGCCATAAC
ACTCACGATG CCACCCGCAA CGCCCTGCGT ACTCGTTACG TGCTGGGCGA TATGCTCGGT
CAATCACCAC AGATGGAGCA GGTGCGGCAG ACTATTTTGC TGTATGCCCG CTCCAGTGCG
GCGGTGTTGA TTGAGGGGGA AACGGGGACG GGCAAAGAGC TGGCGGCCCA GGCAATTCAT
CGGGAATATT TTGCCCGCCA CGATGCGCGA CAGGGCAAAA AGTCGCATCC GTTTGTTGCC
GTCAACTGCG GGGCGATTGC CGAATCGCTG CTGGAAGCGG AGCTGTTTGG CTATGAGGAA
GGGGCGTTTA CCGGCTCGCG ACGCGGAGGT CGCGCCGGGC TGTTCGAAAT TGCCCACGGT
GGCACGCTGT TTCTGGATGA GATTGGCGAA ATGCCGCTAC CTTTGCAGAC TCGCCTGTTA
CGGGTGCTGG AAGAAAAAGA GGTCACCCGC GTCGGCGGGC ATCAGCCTGT TCCGGTAGAT
GTACGGGTCA TTAGCGCCAC TCACTGCAAT CTGGAAGAAG ATATGCGGCA AGGGCAGTTT
CGCCGTGATC TGTTTTATCG GCTGAGTATT TTGCGTCTGC AATTGCCACC ACTGCGCGAG
CGGGTGGCAG ATATTCTTCC GCTGGCGGAA AGCTTTTTGA AAGTGTCTCT GGCGGCGCTC
TCCGCCCCAT TTTCTGCCGC ATTACGCCAG GGATTACAGG CAAGCGAAAC CGTGCTGGTG
CACTACGACT GGCCAGGTAA TATTCGTGAA CTGCGCAATA TGATGGAGCG ACTGGCGCTA
TTTTTAAGTG TGGAACCGAC GCCGGATTTA ACGCCGCAGT TTTTGCAGCT GCTACTGCCG
GAACTGGCGC GCGAGTCGGC GAAAATTCCC GCTCCACGCT TGCTGACACC ACAACAGGCA
CTGGAGAAAT TTAATGGCGA TAAAACAGCA GCGGCGAATT ATTTAGGCAT CAGCCGGACG
ACGTTCTGGC GGCGGCTGAA AAGCTGA
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| Protein sequence | MAHPPRLNDD KPVIWTVSVT RLFELFRDIS LEFDHLANIT PIQLGFEKAV TYIRKKLANE
RCDAIIAAGS NGAYLKSRLS VPVILIKPSG YDVLQALAKA GKLTSSIGVV TYQETIPALV
AFQKTFNLRL DQRSYITEED ARGQINELKA NGTEAVVGAG LITDLAEEAG MTGIFIYSAA
TVRQAFSDAL DMTRMSLRHN THDATRNALR TRYVLGDMLG QSPQMEQVRQ TILLYARSSA
AVLIEGETGT GKELAAQAIH REYFARHDAR QGKKSHPFVA VNCGAIAESL LEAELFGYEE
GAFTGSRRGG RAGLFEIAHG GTLFLDEIGE MPLPLQTRLL RVLEEKEVTR VGGHQPVPVD
VRVISATHCN LEEDMRQGQF RRDLFYRLSI LRLQLPPLRE RVADILPLAE SFLKVSLAAL
SAPFSAALRQ GLQASETVLV HYDWPGNIRE LRNMMERLAL FLSVEPTPDL TPQFLQLLLP
ELARESAKIP APRLLTPQQA LEKFNGDKTA AANYLGISRT TFWRRLKS
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