| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0389 |
|---|
| Symbol | |
|---|
| ID | 6966850 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 396595 |
|---|
| End bp | 397977 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643384441 |
|---|
| Product | putative deaminase |
|---|
| Protein accession | YP_002268956 |
|---|
| Protein GI | 209396661 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 0.776675 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAAA ATAATAGCCG CCGTGAATTT CTGAGCCAGA GCGGTAAGAT GGTCACCGCC
GCCGCGCTGT TTGGTACCTC TGTGCCGCTC GCCCATGCGG CGGTCTCTGG CACCACAAAC
TGCGAAGCGA ACAACACCAT GAAAATCACT GACCCGCATT ACTATCTCGA CAACGTGCTG
CTGGAAACCG GTTTTGACTA CGAAAATGGC GTGGCGGTGC AGACCCGCAC GGCGCGCCAG
ACCGTGGAGA TTCAGAACGG CAAAATTGTC GCGCTGCGCG AGAATAAGCA GCACCCGGAT
GCCACGCTGC CGCACTATGA CGCTGGCGAT AAGCTGATGC TGCCCACCAC CCGCGACATG
CATATTCATC TCGACAAAAC GTTTTACGGC GGGCCGTGGC GCTCGCTCAA TCGCCCGGCA
GGCACCACCA TCCAGGACAT GATCAAACTC GAGCAGAAAA TGCTGCCGGA GCTGCAACCG
TACACTCAGG AGCGGGCAGA AAAACTGATT GATTTATTGC AGTCGAAAGG CACCACCATT
GCCCGCAGCC ACTGCAATAT CGAACCGGTT TCCGGCCTGA AAAATCTGCA AAATTTGCAG
GCGGTGCTGG CGCGACGTCA GGCGGGCTTT GAGTGTGAAA TCGTCGCCTT CCCGCAGCAC
GGTTTGCTGC TGTCGAAATC GGAACCCTTA ATGCGTGAAG CAATGCAGGC GGGTGCGCAT
TACGTCGGCG GGCTGGACCC GACCAGTGTC GATGGCGCGA TGGAAAAATC CCTCGACACC
ATGTTCCAGA TTGCGCTGGA CTACGACAAA GGCGTCGATA TTCACCTGCA CGAAACCACT
CCGTCGGGCG TGGCAGCCAT CAATTATATG GTTGAAACGG TAGAGAAAAC GCCTCAACTG
AAAGGTAAGC TGACCATCAG CCACGCCTTT GCGCTGGCTA CGCTCAACGA GCAACAGGTA
GATGAACTGG CGCATCGCAT GGCGGCGCAG CAAATTTCTA TCGCCTCGAC GGTGCCGATT
GGCACGCTGC ATATGCCGCT CAAACAGTTG CACGACAAAG GCGTAAAAGT GATGACTGGC
ACTGACAGCG TTATCGACCA CTGGTCGCCT TATGGTCTGG GCGACATGCT GGAAAAAGCC
AATCTCTACG CGCAGCTCTA TATTCGTCCT AACGAACAGA ACCTCTCCCG TTCGCTGTTT
CTAGCCACTG GCGATGTATT GCCGCTGAAT GAAAAAGGCG AGCGTGTATG GCCAAAAGCG
CAGGATGACG CCAGCTTTGT GCTGGTGGAC GCCTCCTGTT CCGCCGAGGC GGTGGCGCGT
ATCTCGCCGA GAACCGCAAC GTTCCATAAA GGGCAACTGG TGTGGGGGAG TGTGGCAGGT
TGA
|
|---|
| Protein sequence | MKENNSRREF LSQSGKMVTA AALFGTSVPL AHAAVSGTTN CEANNTMKIT DPHYYLDNVL
LETGFDYENG VAVQTRTARQ TVEIQNGKIV ALRENKQHPD ATLPHYDAGD KLMLPTTRDM
HIHLDKTFYG GPWRSLNRPA GTTIQDMIKL EQKMLPELQP YTQERAEKLI DLLQSKGTTI
ARSHCNIEPV SGLKNLQNLQ AVLARRQAGF ECEIVAFPQH GLLLSKSEPL MREAMQAGAH
YVGGLDPTSV DGAMEKSLDT MFQIALDYDK GVDIHLHETT PSGVAAINYM VETVEKTPQL
KGKLTISHAF ALATLNEQQV DELAHRMAAQ QISIASTVPI GTLHMPLKQL HDKGVKVMTG
TDSVIDHWSP YGLGDMLEKA NLYAQLYIRP NEQNLSRSLF LATGDVLPLN EKGERVWPKA
QDDASFVLVD ASCSAEAVAR ISPRTATFHK GQLVWGSVAG
|
|---|
| |