| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0332 |
|---|
| Symbol | |
|---|
| ID | 6969651 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 338172 |
|---|
| End bp | 338861 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643384393 |
|---|
| Product | putative xanthine dehydrogenase iron-sulfur-binding subunit |
|---|
| Protein accession | YP_002268908 |
|---|
| Protein GI | 209399171 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACC AAGGCGAATA CCCCGAAGAT AATCGGGTTG GGAAGCATGA GCCGCACGAT
TTAAGTTTGA CCCGTCGCGA TCTGATTAAA GTGAGCGCCG CAACGGCGGC GGCCGCCGTG
GTTTATCCTC ATTCTACGCT TGCGGCAAGC GTTCCGGCAG CTACACCCGC GCCTGAGATA
ATGCCCCTGA CACTTAAGGT GAACGGCAAA ACCGAGCAGC TTGAGGTGGA TACCCGAACC
ACGCTACTGG ACGCTTTGCG TGAAAATCTG CATTTGATCG GTACCAAGAA AGGTTGCGAT
CACGGACAGT GCGGAGCCTG TACCGTGCTG GTCAATGGTC GCAGGCTTAA TGCCTGCCTG
ACGCTTGCAG TCATGCATCA GGGGGCCGAG ATCACCACCA TTGAAGGCCT GGGTTCACCA
GATAATCTTC ACCCCATGCA GGCGGCCTTT ATCAAGCATG ATGGCTTCCA GTGCGGCTAC
TGCACCTCCG GGCAAATTTG CTCATCAGTA GCGGTGCTAA AAGAGATTCA GGACGGCATT
CCCAGTCACG TCACGGTCGA TTTGGTTTCC CCTCCAGAAA GAACTGCCGA TGAGATCCGT
GAACGTATGA GCGGCAACAT CTGTCGCTGT GGTGCATACG CTAACATCCT TGCCGCCATT
GAAGACGCTG CGGGGGAGAT AAAATCATGA
|
|---|
| Protein sequence | MSNQGEYPED NRVGKHEPHD LSLTRRDLIK VSAATAAAAV VYPHSTLAAS VPAATPAPEI
MPLTLKVNGK TEQLEVDTRT TLLDALRENL HLIGTKKGCD HGQCGACTVL VNGRRLNACL
TLAVMHQGAE ITTIEGLGSP DNLHPMQAAF IKHDGFQCGY CTSGQICSSV AVLKEIQDGI
PSHVTVDLVS PPERTADEIR ERMSGNICRC GAYANILAAI EDAAGEIKS
|
|---|
| |