| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0326 |
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| Symbol | |
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| ID | 6970067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 330404 |
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| End bp | 331288 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643384387 |
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| Product | LysR substrate binding domain protein |
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| Protein accession | YP_002268902 |
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| Protein GI | 209399565 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.457404 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAAA GGGAGAACTA CAACGAGCTA TACCTGTTTA TGCAGGTGGT GCGGGAAGGC
AGCTTTACCG CAGCGGCTAA GCGGCTGGGT CTTGCTCAGT CAGGAGTCAG CCGTTCTGTT
CGCGAGCTTG AAGAAAGGCT GGGCGTCCAG CTGCTGGTGC GCACCACGCG TAAACTGTCG
CTGACGCAAG CAGGCGAGCA GCTCTACCAG AAGACGGCAT CTGGATTTGA AATGTTAGAT
CTTGGGCTTG CCACGCTGGC GCACTATCGA GAGACGCCCT CCGGCACGGT GCGTATCAAT
GCCAGCCAGC ACGCGATTGA TAAATGCCTG CTGCCAAAGC TGGCGGTATT TAAACAGCGA
TATCCTGATA TCCAGCTTGA ACTGATAAAT GAGAGCCGGT TCGTCGATAT CATCGAGGAA
AGATTCGATG CAGGTGTCCG CCTGGGGCCT GAAGTCAGCC AGGGCATGGT CGCGGTACGC
ATCACGCCCG ATATGGAGAT GGCAATTGTG GGGACTCCGG AACATTTTCG TCGCTATGGT
TTTCCGCAAA CCCCGGCGGA TTTAAAGGCG CATCCCTGTA TCGCCTATCA GTTTGCCGAC
GGCAGCGTAT ACCAGTGGGA ACTCAATCAG GATGATAAAA AAATCACTCA TCAACCCGAA
GGACAATGGG CCTTTTCCGA CAGCTATATG GAAGCAGAAG CCGCCCGGCT GGGCCTCGGG
TTGGCCTATG TTCCTGTTGA ACTGGTCGCG GATGATTTAG AACACGGTAA GCTTATCAGA
GTGTTGCAGC GTTACAGCCT GCGAATGGAG GGATTGTTTC TCTATTACCC TCATCGCAAC
GTCTCCCCCG CTCTGCGGAT GGTCATTGAT ACATTGAAAA TCTGA
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| Protein sequence | MAKRENYNEL YLFMQVVREG SFTAAAKRLG LAQSGVSRSV RELEERLGVQ LLVRTTRKLS
LTQAGEQLYQ KTASGFEMLD LGLATLAHYR ETPSGTVRIN ASQHAIDKCL LPKLAVFKQR
YPDIQLELIN ESRFVDIIEE RFDAGVRLGP EVSQGMVAVR ITPDMEMAIV GTPEHFRRYG
FPQTPADLKA HPCIAYQFAD GSVYQWELNQ DDKKITHQPE GQWAFSDSYM EAEAARLGLG
LAYVPVELVA DDLEHGKLIR VLQRYSLRME GLFLYYPHRN VSPALRMVID TLKI
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