Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_0220 |
Symbol | dkgB |
ID | 6972360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 232479 |
End bp | 233282 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643384293 |
Product | 2,5-diketo-D-gluconate reductase B |
Protein accession | YP_002268810 |
Protein GI | 209397612 |
COG category | [R] General function prediction only |
COG ID | [COG0656] Aldo/keto reductases, related to diketogulonate reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.167357 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTATCC CTGCATTTGG TTTAGGTACT TTCCGTCTGA AAGACGACGT TGTTATTTCA TCTGTGAAAA CGGCGCTTGA ACTTGGTTAT CGCGCAATTG ATACTGCACA AATCTATGAT AACGAAGCCG CAGTAGGTCT GGCGATTGCA GAAAGTGGCG TGCCACGTCA TGAACTCTAC ATCACCACTA AAATCTGGAT TGAAAATCTC AGCAAAGACA AATTGATCCC GAGTCTAAAA GAGAGCCTGC AAAAATTGCG TACCGATTAT GTTGATCTGA CGCTAATCCA CTGGCCGTCA CCAAACGATG AAGTCTCTGT TGAAGAGTTT ATGCAGGCGC TGCTGGAAGC CAAAAAAGAA GGGTTGACGC GTGAGATCGG TATTTCCAAC TTCACGATCC CATTGATGGA AAAGGCGATT GCTGCTGTTG GCGCTGAAAA CATCGCTACT AACCAGATTG AACTCTCTCC TTATCTGCAA AACCGTAAAG TGGTTGCCTG GGCTAAACAG CACGGCATCC ATATTACTTC CTATATGACG CTGGCGTATG GTAAGGCCCT GAAAGATGAG GTTATTGCTC GTATCGCAGC TAAACACAAT GCGACTCCGG CACAAGTGAT TCTGGCGTGG GCTATGGGGG AAGGTTACTC AGTAATTCCT TCTTCTACTA AACGTGAAAA CCTGGAGAGT AATCTTAAGG CACAAAATTT ACAGCTTGAT GCCGAAGATA AAAAAGCGAT CGCCGCACTG GATTGCAACG ACCGCCTGGT TAGCCCGGAA GGTCTGGCTC CTGAATGGGA TTAA
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Protein sequence | MAIPAFGLGT FRLKDDVVIS SVKTALELGY RAIDTAQIYD NEAAVGLAIA ESGVPRHELY ITTKIWIENL SKDKLIPSLK ESLQKLRTDY VDLTLIHWPS PNDEVSVEEF MQALLEAKKE GLTREIGISN FTIPLMEKAI AAVGAENIAT NQIELSPYLQ NRKVVAWAKQ HGIHITSYMT LAYGKALKDE VIARIAAKHN ATPAQVILAW AMGEGYSVIP SSTKRENLES NLKAQNLQLD AEDKKAIAAL DCNDRLVSPE GLAPEWD
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