| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0189 |
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| Symbol | lpxD |
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| ID | 6968657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 204295 |
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| End bp | 205320 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643384264 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| Protein accession | YP_002268787 |
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| Protein GI | 209398323 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000241042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTCAA TTCGACTGGC TGATTTAGCG CAGCAGTTGG ATGCAGAACT ACACGGTGAT
GGCGATATCG TCATCACCGG CGTTGCGTCC ATGCAATCTG CACAAACAGG TCACATTACG
TTCATGGTTA ACCCAAAATA CCGTGAGCAT TTAGGCTTGT GCCAGGCGTC CGCGGTTGTC
ATGACCCAGG ACGATCTTCC TTTCGCGAAA AGTGCCGCGC TGGTAGTGAA GAATCCCTAC
CTGACTTACG CGCGCATGGC GCAAATTTTA GATACCACGC CGCAGCCCGC GCAGAACATT
GCACCCAGTG CGGTGATCGA CGCGACGGCG AAGCTGGGTA ACAACGTATC GATTGGCGCT
AACGCGGTGA TTGAATCCGG CGTTGAACTG GGCGATAACG TGATTATCGG TGCCGGTTGC
TTCGTAGGTA AAAACAGCAA AATCGGTGCA GGTTCGCGTC TCTGGGCGAA CGTAACCATT
TACCATGAGA TCCAGATCGG TCAGAATTGC CTGATCCAGT CCGGAACAGT GGTAGGCGCA
GACGGCTTTG GTTATGCCAA CGATCGTGGT AACTGGGTGA AGATCCCACA GATTGGTCGC
GTAATTATTG GCGATCGCGT GGAGATCGGT GCCTGCACTA CCATCGATCG CGGCGCGCTG
GATGACACTG TTATTGGCAA TGGCGTGATC ATTGATAACC AGTGCCAGAT TGCACATAAC
GTCGTGATTG GCGACAATAC GGCGGTTGCC GGTGGCGTCA TTATGGCGGG CAGCCTGAAA
ATTGGTCGTT ACTGCATGAT CGGCGGAGCC AGCGTAATCA ACGGGCATAT GGAAATATGC
GACAAAGTGA CGGTTACGGG CATGGGTATG GTGATGCGTC CCATCACTGA ACCAGGCGTC
TATTCCTCAG GCATTCCGCT GCAACCCAAC AAAGTCTGGC GCAAAACCGC TGCACTGGTG
ATGAACATTG ATGACATGAG CAAGCGTCTG AAATCGCTTG AGCGCAAGGT TAATCAACAA
GACTAA
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| Protein sequence | MPSIRLADLA QQLDAELHGD GDIVITGVAS MQSAQTGHIT FMVNPKYREH LGLCQASAVV
MTQDDLPFAK SAALVVKNPY LTYARMAQIL DTTPQPAQNI APSAVIDATA KLGNNVSIGA
NAVIESGVEL GDNVIIGAGC FVGKNSKIGA GSRLWANVTI YHEIQIGQNC LIQSGTVVGA
DGFGYANDRG NWVKIPQIGR VIIGDRVEIG ACTTIDRGAL DDTVIGNGVI IDNQCQIAHN
VVIGDNTAVA GGVIMAGSLK IGRYCMIGGA SVINGHMEIC DKVTVTGMGM VMRPITEPGV
YSSGIPLQPN KVWRKTAALV MNIDDMSKRL KSLERKVNQQ D
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