| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0185 |
|---|
| Symbol | cdsA |
|---|
| ID | 6967788 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 199002 |
|---|
| End bp | 199859 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643384260 |
|---|
| Product | CDP-diglyceride synthase |
|---|
| Protein accession | YP_002268783 |
|---|
| Protein GI | 209399460 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0575] CDP-diglyceride synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000611994 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTGAAGT ATCGCCTGAT ATCTGCTTTT GTGTTAATAC CCGTCGTCAT CGCGGCGTTG
TTTCTGTTGC CGCCGGTGGG GTTCGCCATT GTAACGCTGG TGGTCTGCAT GCTGGCAGCG
TGGGAATGGG GACAGCTTAG CGGTTTTACC ACTCGTTCGC AGCGAGTATG GTTGGCGGTG
TTATGCGGGT TATTGTTGGC GCTGATGCTT TTTCTGTTGC CGGAATATCA CCGAAATATT
CATCAACCGC TGGTTGAAAT CTCACTTTGG GCTTCGCTGG GTTGGTGGAT TGTCGCGCTA
TTGCTGGTGC TGTTTTACCC AGGTTCCGCA GCAATCTGGC GTAACTCTAA AACATTGCGC
CTTATTTTTG GCGTGCTAAC CATTGTTCCC TTCTTCTGGG GCATGCTGGC GTTACGGGCC
TGGCACTATG ACGAGAATCA TTACAGTGGC GCAATATGGC TGCTCTATGT CATGATCCTG
GTATGGGGCG CTGACTCCGG CGCATATATG TTTGGCAAAT TGTTTGGTAA ACATAAGCTG
GCACCGAAGG TTTCTCCGGG TAAAACCTGG CAAGGCTTTA TCGGTGGACT CGCTACTGCA
GCGGTAATCT CATGGGGTTA TGGCATGTGG GCGAATCTCG ACGTCGCTCC CGTCACCTTA
CTCATTTGCT CTATTGTCGC AGCGTTAGCC TCAGTGCTCG GCGATCTGAC CGAGAGTATG
TTTAAGCGTG AAGCAGGAAT TAAGGACAGC GGTCATTTAA TTCCAGGACA CGGTGGTATT
TTAGATCGTA TTGATAGCCT GACGGCTGCG GTACCGGTCT TTGCTTGCTT GTTGTTACTG
GTATTCAGGA CGCTTTAA
|
|---|
| Protein sequence | MLKYRLISAF VLIPVVIAAL FLLPPVGFAI VTLVVCMLAA WEWGQLSGFT TRSQRVWLAV
LCGLLLALML FLLPEYHRNI HQPLVEISLW ASLGWWIVAL LLVLFYPGSA AIWRNSKTLR
LIFGVLTIVP FFWGMLALRA WHYDENHYSG AIWLLYVMIL VWGADSGAYM FGKLFGKHKL
APKVSPGKTW QGFIGGLATA AVISWGYGMW ANLDVAPVTL LICSIVAALA SVLGDLTESM
FKREAGIKDS GHLIPGHGGI LDRIDSLTAA VPVFACLLLL VFRTL
|
|---|
| |