Gene ECH74115_0174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_0174 
SymboldapD 
ID6972191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp188590 
End bp189414 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content53% 
IMG OID643384250 
Product2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 
Protein accessionYP_002268773 
Protein GI209400200 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2171] Tetrahydrodipicolinate N-succinyltransferase 
TIGRFAM ID[TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.569241 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAGT TACAGAACAT TATTGAAACC GCTTTTGAAC GCCGTGCCGA GATCACGCCA 
GCCAATGCAG ACACCGTTAC CCGCGAAGCG GTAAATCAGG TGATCGCCCT GCTGGATTCC
GGCGCACTGC GTGTAGCGGA AAAAATTGAC GGTCAGTGGG TGACGCATCA GTGGTTGAAA
AAAGCGGTGC TGCTCTCTTT CCGTATTAAT GATAATCAGG TGATCGAAGG GGCAGAAAGC
CGCTACTTCG ACAAAGTGCC GATGAAATTC GCCGACTACG ACGAAGCACG TTTCCAGAAA
GAAGGCTTCC GCGTTGTACC ACCTGCGGCG GTACGTCAGG GTGCGTTTAT TGCCCGTAAC
ACCGTGCTGA TGCCGTCTTA CGTCAACATC GGCGCATATG TTGATGAAGG CACCATGGTC
GATACCTGGG CGACCGTCGG TTCTTGTGCG CAGATTGGTA AAAACGTCCA CCTTTCCGGT
GGCGTGGGCA TCGGCGGTGT GCTGGAACCG CTGCAGGCTA ACCCAACCAT CATTGAAGAT
AATTGCTTCA TCGGCGCGCG CTCTGAAGTA GTTGAAGGGG TGATTGTCGA AGAAGGTTCC
GTCATTTCCA TGGGCGTATA CATTGGTCAG AGCACCCGTA TTTACGACCG TGAAACCGGC
GACATCCACT ACGGTCGCGT TCCGGCGGGG TCTGTGGTTG TTTCAGGTAA TCTGCCGTCG
AAAGATGGCA AATACAGCCT CTACTGTGCG GTTATCGTTA AGAAAGTTGA CGCGAAAACT
CGCGGCAAAG TCGGCATTAA CGAACTGCTG CGTACCATCG ACTAA
 
Protein sequence
MQQLQNIIET AFERRAEITP ANADTVTREA VNQVIALLDS GALRVAEKID GQWVTHQWLK 
KAVLLSFRIN DNQVIEGAES RYFDKVPMKF ADYDEARFQK EGFRVVPPAA VRQGAFIARN
TVLMPSYVNI GAYVDEGTMV DTWATVGSCA QIGKNVHLSG GVGIGGVLEP LQANPTIIED
NCFIGARSEV VEGVIVEEGS VISMGVYIGQ STRIYDRETG DIHYGRVPAG SVVVSGNLPS
KDGKYSLYCA VIVKKVDAKT RGKVGINELL RTID