| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0172 |
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| Symbol | cdaR |
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| ID | 6966792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 186643 |
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| End bp | 187800 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643384248 |
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| Product | carbohydrate diacid transcriptional activator CdaR |
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| Protein accession | YP_002268771 |
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| Protein GI | 209396144 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3835] Sugar diacid utilization regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGGCT GGCATCTTGA TACCAAAATG GCGCAGGATA TCGTGGCACG TACCATGCGC
ATCATCGATA CCAATATCAA CGTAATGGAT GCCCGTGGGC GAATTATCGG CAGCGGCGAT
CGTGAGCGTA TTGGTGAATT GCACGAAGGT GCATTGCTGG TACTTTCACA GGGACGAGTC
GTCGATATCG ATGACGCGGT GGCACGTCAT CTGCACGGTG TGCGGCAAGG GATTAATCTA
CCGTTACGGC TGGAAGGTGA AATTGTCGGC GTAATTGGCC TGACAGGTGA ACCAGAGAAT
CTGCGTAAAT ATGGCGAACT GGTCTGCATG ACGGCTGAAA TGATGCTGGA ACAGTCGCGG
TTGATGCACT TGTTGGCGCA GGATAGCCGT TTGCGGGAGG AACTGGTGAT GAACCTGATT
CAGGCAGAGG AGAATACTCC CGCACTTACT GAATGGGCGC AACGGCTGGG GATCGATCTC
AATCAACCGC GAGTGGTGGC TATTGTTGAG GTCGACAGCG GTCAGCTTGG TGTGGACAGC
GCAATGGCGG AGTTACAACA ACTGCAAAAC GCGCTGACTA CGCCCGAGCG TAATAATCTG
GTGGCGATTG TCTCGCTAAC CGAAATGGTG GTGTTGAAAC CGGCGTTGAA CTCTTTTGGG
CGCTGGGATG TAGAAGATCA TCGTAAGCGA GTTGAACAAC TGATTACCCG CATGAAAGAG
TACGGCCAGC TGCGTTTTCG CGTTTCACTG GGCAACTATT TTACCGGTCC TGGCAGTATT
GCCCGATCCT ATCGTACGGC GAAAACGACG ATGGTGGTGG GTAAACAGCG GATGCCAGAA
AGTCGCTGCT ATTTTTATCA GGATCTGATG TTACCTGTGT TACTCGACAG TTTGCGTGGC
GACTGGCAGG CCAACGAACT GGCGCGACCG CTGGCGCGGC TGAAAGCGAT GGACAATAAC
GGCTTGCTGC GACGAACGCT GGCGGCGTGG TTTCGTCACA ATGTGCAACC GCTGGCAACG
TCAAAGGCGT TGTTTATTCA TCGTAATACC CTGGAGTATC GGCTTAATCG TATATCGGAA
CTGACCGGGC TTGATTTGGG CAATTTTGAT GACAGGTTGC TGCTGTATGT GGCGTTACAA
CTGGATGAAG AGCGGTAG
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| Protein sequence | MAGWHLDTKM AQDIVARTMR IIDTNINVMD ARGRIIGSGD RERIGELHEG ALLVLSQGRV
VDIDDAVARH LHGVRQGINL PLRLEGEIVG VIGLTGEPEN LRKYGELVCM TAEMMLEQSR
LMHLLAQDSR LREELVMNLI QAEENTPALT EWAQRLGIDL NQPRVVAIVE VDSGQLGVDS
AMAELQQLQN ALTTPERNNL VAIVSLTEMV VLKPALNSFG RWDVEDHRKR VEQLITRMKE
YGQLRFRVSL GNYFTGPGSI ARSYRTAKTT MVVGKQRMPE SRCYFYQDLM LPVLLDSLRG
DWQANELARP LARLKAMDNN GLLRRTLAAW FRHNVQPLAT SKALFIHRNT LEYRLNRISE
LTGLDLGNFD DRLLLYVALQ LDEER
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