Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_0172 |
Symbol | cdaR |
ID | 6966792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 186643 |
End bp | 187800 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643384248 |
Product | carbohydrate diacid transcriptional activator CdaR |
Protein accession | YP_002268771 |
Protein GI | 209396144 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3835] Sugar diacid utilization regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGGCT GGCATCTTGA TACCAAAATG GCGCAGGATA TCGTGGCACG TACCATGCGC ATCATCGATA CCAATATCAA CGTAATGGAT GCCCGTGGGC GAATTATCGG CAGCGGCGAT CGTGAGCGTA TTGGTGAATT GCACGAAGGT GCATTGCTGG TACTTTCACA GGGACGAGTC GTCGATATCG ATGACGCGGT GGCACGTCAT CTGCACGGTG TGCGGCAAGG GATTAATCTA CCGTTACGGC TGGAAGGTGA AATTGTCGGC GTAATTGGCC TGACAGGTGA ACCAGAGAAT CTGCGTAAAT ATGGCGAACT GGTCTGCATG ACGGCTGAAA TGATGCTGGA ACAGTCGCGG TTGATGCACT TGTTGGCGCA GGATAGCCGT TTGCGGGAGG AACTGGTGAT GAACCTGATT CAGGCAGAGG AGAATACTCC CGCACTTACT GAATGGGCGC AACGGCTGGG GATCGATCTC AATCAACCGC GAGTGGTGGC TATTGTTGAG GTCGACAGCG GTCAGCTTGG TGTGGACAGC GCAATGGCGG AGTTACAACA ACTGCAAAAC GCGCTGACTA CGCCCGAGCG TAATAATCTG GTGGCGATTG TCTCGCTAAC CGAAATGGTG GTGTTGAAAC CGGCGTTGAA CTCTTTTGGG CGCTGGGATG TAGAAGATCA TCGTAAGCGA GTTGAACAAC TGATTACCCG CATGAAAGAG TACGGCCAGC TGCGTTTTCG CGTTTCACTG GGCAACTATT TTACCGGTCC TGGCAGTATT GCCCGATCCT ATCGTACGGC GAAAACGACG ATGGTGGTGG GTAAACAGCG GATGCCAGAA AGTCGCTGCT ATTTTTATCA GGATCTGATG TTACCTGTGT TACTCGACAG TTTGCGTGGC GACTGGCAGG CCAACGAACT GGCGCGACCG CTGGCGCGGC TGAAAGCGAT GGACAATAAC GGCTTGCTGC GACGAACGCT GGCGGCGTGG TTTCGTCACA ATGTGCAACC GCTGGCAACG TCAAAGGCGT TGTTTATTCA TCGTAATACC CTGGAGTATC GGCTTAATCG TATATCGGAA CTGACCGGGC TTGATTTGGG CAATTTTGAT GACAGGTTGC TGCTGTATGT GGCGTTACAA CTGGATGAAG AGCGGTAG
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Protein sequence | MAGWHLDTKM AQDIVARTMR IIDTNINVMD ARGRIIGSGD RERIGELHEG ALLVLSQGRV VDIDDAVARH LHGVRQGINL PLRLEGEIVG VIGLTGEPEN LRKYGELVCM TAEMMLEQSR LMHLLAQDSR LREELVMNLI QAEENTPALT EWAQRLGIDL NQPRVVAIVE VDSGQLGVDS AMAELQQLQN ALTTPERNNL VAIVSLTEMV VLKPALNSFG RWDVEDHRKR VEQLITRMKE YGQLRFRVSL GNYFTGPGSI ARSYRTAKTT MVVGKQRMPE SRCYFYQDLM LPVLLDSLRG DWQANELARP LARLKAMDNN GLLRRTLAAW FRHNVQPLAT SKALFIHRNT LEYRLNRISE LTGLDLGNFD DRLLLYVALQ LDEER
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