| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0157 |
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| Symbol | hrpB |
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| ID | 6971532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 166363 |
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| End bp | 168837 |
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| Gene Length | 2475 bp |
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| Protein Length | 824 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643384234 |
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| Product | ATP-dependent RNA helicase HrpB |
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| Protein accession | YP_002268757 |
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| Protein GI | 209396555 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTACAAT GTGGCGCGAA GAATGTTAAC CCTCTGGAGC GTTTTGTGTC GTCGTTGCCC
GTTGCTGCCG TGTTACCTGA ATTACTTACC GCTCTCGATT ATGCGCCGCA GGTATTATTA
AGTGCGCCGA CCGGGGCCGG GAAATCAACC TGGCTGCCGC TGCAACTGCT GGCGCATCCC
GGCATTAACG GGAAAATTAT CCTCCTGGAG CCACGGCGTC TGGCGGCGCG TAACGTCGCG
CAACGGCTGG CGGAGCTGCT TAACGAAAAG CCAGGCGATA CCGTTGGCTA CCGGATGCGT
GCGCAAAACT GCGTCGGGCC GAATACCCGC CTGGAAGTAG TTACCGAAGG CGTGCTGACG
CGGATGATCC AGCGTGACCC GGAACTGAGC GGTGTTGGAT TGGTGATCCT TGATGAATTT
CATGAGCGTA GCTTGCAGGC GGATTTGGCG TTGGCGCTGT TACTCGATGT GCAACAAGGT
CTGCGTGATG ACCTTAAACT GCTGATTATG TCGGCTACGC TGGACAACGA CCGCTTGCAG
CAAATGCTGC CAGAAGCGCC CGTCGTCATC TCAGAAGGGC GCTCGTTTCC GGTTGAACGC
CGTTATTTAC CGCTGCCCAC GCATCAGCGT TTTGACGATG CCGTTGCGGT AGCCACCGCT
GAAATGCTGC GTCAGGAAAG CGGATCATTA CTGTTATTTT TACCTGGCGT CGGAGAAATT
CAGCGTGTGC AGGAACAACT GGCTTCGCGC ATCGGCAGTG ATGTATTGCT CTGCCCGCTG
TATGGCGCGT TGTCGCTGAA CGATCAGCGA AAAGCGATCC TCCCGGCACC GCAAGGGATG
CGCAAAGTGG TGCTGGCGAC CAATATTGCT GAAACCAGTT TAACCATTGA AGGTATTCGT
CTGGTGGTGG ATTGTGCCCA GGAAAGGGTG GCGCGTTTTG ATCCGCGAAC AGGGCTTACG
CGGTTGATTA CTCAGCGAAT CAGTCAGGCG TCGATGACGC AGCGTGCCGG GCGCGCCGGG
CGTCTGGAGC CGGGTATCTG CCTGCATTTA ATCGCCAAAG AACAAGCAGA ACGCGCTACC
GCGCAAAGTG AACCGGAGAT CTTACAAAGC GATCTTTCCG GTTTGCTGAT GGAATTACTG
CAATGGGGAT GCAGCGATCC GGCGCAGATG AGCTGGCTGG ATCAACCGCC AACGGTGAAT
CTACTGGCCG CGAAACGTCT GTTACAAATG CTGGGGGCGC TGGACGGTGA ACGGCTTAGT
GCGCAAGGGC AAAAAATGGC AGCGCTGGGT AACGATCCGC GTTTAGCGGC AATGCTGGTT
AGCGCAAAGA GCGACGACGA AGCTGCTACC GCGGCAAAAA TTGCCGCCAT TCTCGAAGAG
CCGCCACGGA TGGGCAATAG TGACCTGGGC GTGGCGTTTT CGCGCAATCA ACCAGCCTGG
CAGCAACGTA GTCAGCAACT GTTAAAACGC TTAAACGTAC GCGGCGGTGA GGCAGACAGT
TCGCTTATCG CGCCGCTACT TGCCGGGGCG TTTGCCGATC GCATTGCTCG CCGCCGTGGG
CAAGATGGAC GCTATCAACT GGCAAACGGC ATGGGGGCGA TGCTTGATGC CGACGACGCG
CTAAGTCGCC ACGAATGGTT GATCGCGCCG TTATTATTGC AGGGCAGCGC CTCGCCGGAT
GCGCGGATTT TACTGGCGTT ACCGGTCGAT ATTGATGAAT TAGTACAACG CTGTCCGCAG
CTGGTGCAGC AATCTGACAC CGTGGAATGG GATGACGCGC AAGGTACGCT GAAAGCCTGG
CGTCGGCTGC AAATCGGTCA GTTGACGGTG AAAGTGCAGC CGTTGGCGAA ACCGTCAGAA
GACGAGTTGC ATCAGGCGAT GCTTAACGGC ATCCGTGATA AAGGTTTAAG CGTGCTCAAC
TGGACGGCGG AAGCGGAACA GCTACGCTTG CGTTTGTTAT GCGCCGGAAA GTGGTTGCCA
GAATATGACT GGCCAGCGGT TGATGATGAA AGTTTGTTGG CGACGCTGGA AACGTGGCTG
CTGCCACATA TGGCCGGTGT ACATTCACTA CGCGGCCTGA AATCACTCGA CATTTATCAG
GCACTACGCG GATTACTTGA TTGGGGAATG CAGCAACGTC TGGATAGTGA ATTGCCTGCG
CATTACACTG TGCCGACGGG AAGCCGGATC GCCATTCGTT ATCATGAAGA TAACCCGCCC
GCGCTGGCGG TGAGAATGCA GGAGATGTTT GGTGAGGCCA CTAATCCGAC GATCGCCCAG
GGGCGCGTGC CGCTGGTGCT GGAATTGCTT TCACCCGCCC AAAGGCCGCT GCAAATCACG
CGTGATTTGG GGGCCTTCTG GAAAGGGGCG TATCGTGAGG TGCAAAAGGA GATGAAAGGG
CGTTATCCCA AACACGTCTG GCCGGACGAC CCGGCAAACA CGGCACCGAC GCGACGGACG
AAAAAGTATT CGTAA
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| Protein sequence | MLQCGAKNVN PLERFVSSLP VAAVLPELLT ALDYAPQVLL SAPTGAGKST WLPLQLLAHP
GINGKIILLE PRRLAARNVA QRLAELLNEK PGDTVGYRMR AQNCVGPNTR LEVVTEGVLT
RMIQRDPELS GVGLVILDEF HERSLQADLA LALLLDVQQG LRDDLKLLIM SATLDNDRLQ
QMLPEAPVVI SEGRSFPVER RYLPLPTHQR FDDAVAVATA EMLRQESGSL LLFLPGVGEI
QRVQEQLASR IGSDVLLCPL YGALSLNDQR KAILPAPQGM RKVVLATNIA ETSLTIEGIR
LVVDCAQERV ARFDPRTGLT RLITQRISQA SMTQRAGRAG RLEPGICLHL IAKEQAERAT
AQSEPEILQS DLSGLLMELL QWGCSDPAQM SWLDQPPTVN LLAAKRLLQM LGALDGERLS
AQGQKMAALG NDPRLAAMLV SAKSDDEAAT AAKIAAILEE PPRMGNSDLG VAFSRNQPAW
QQRSQQLLKR LNVRGGEADS SLIAPLLAGA FADRIARRRG QDGRYQLANG MGAMLDADDA
LSRHEWLIAP LLLQGSASPD ARILLALPVD IDELVQRCPQ LVQQSDTVEW DDAQGTLKAW
RRLQIGQLTV KVQPLAKPSE DELHQAMLNG IRDKGLSVLN WTAEAEQLRL RLLCAGKWLP
EYDWPAVDDE SLLATLETWL LPHMAGVHSL RGLKSLDIYQ ALRGLLDWGM QQRLDSELPA
HYTVPTGSRI AIRYHEDNPP ALAVRMQEMF GEATNPTIAQ GRVPLVLELL SPAQRPLQIT
RDLGAFWKGA YREVQKEMKG RYPKHVWPDD PANTAPTRRT KKYS
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