| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0156 |
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| Symbol | ligT |
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| ID | 6971525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 165804 |
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| End bp | 166334 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643384233 |
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| Product | 2'-5' RNA ligase |
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| Protein accession | YP_002268756 |
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| Protein GI | 209400335 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1514] 2'-5' RNA ligase |
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| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.177994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGACC CGCAACGTCT GTTCTTTGCT ATCGACTTAC CTGCAGAAAT CCGCGAACAG
ATTATCCACT GGCGCGCCAC ACACTTCCCA CTTGAGGCGG GACGTCCGGT CGCCGCCGAT
AATTTGCATC TGACTCTGGC ATTTTTAGGC GAAGTGAGCG CAGAGAAAGA GAAGGCGCTT
TCTCTTTTAG CCGGACGGAT TCGTCAACCT GGTTTCACAC TCACGCTTGA TGACGCCGGC
CAATGGCTGC GTTCGCGTGT GGTGTGGTTA GGGATGCGTC AGCCGCCACG CGGCTTAATC
CAGCTGGCGA ATATGCTCCG TTCACAGGCT GCCCGCAGCG GTTGTTTTCA AAGCAATCGT
CCGTTTCATC CACATATTAC CTTATTGCGC GACGCCAGCG AGGCGGTGAC AATCCCGCCG
CCAGGTTTTA ACTGGTCATA TGCGGTGACG GAGTTCACCC TTTACGCCTC CTCGTTTGCC
CGTGGACGCA CACGCTACAC GCCGCTAAAA CGCTGGGTGC TAACGCAATA A
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| Protein sequence | MSDPQRLFFA IDLPAEIREQ IIHWRATHFP LEAGRPVAAD NLHLTLAFLG EVSAEKEKAL
SLLAGRIRQP GFTLTLDDAG QWLRSRVVWL GMRQPPRGLI QLANMLRSQA ARSGCFQSNR
PFHPHITLLR DASEAVTIPP PGFNWSYAVT EFTLYASSFA RGRTRYTPLK RWVLTQ
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